| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1751 |
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| Symbol | ushA |
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| ID | 5137193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1871711 |
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| End bp | 1873372 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533208 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_001217690 |
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| Protein GI | 147673600 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000978587 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAG GCCTCATTCT AAAATCCGTC CTCAGTGCAG CCATTATTGC CTCTTTGGCA
GGTTGTGCAA CTGCACCCGC TCAGCAGTGG GAAGCAGACA AAACCTACAA ACTCACTATT
CTGCACACCA ACGACCACCA TGGCCGTTTC TGGCAAAACC AGTATGGTGA ATATGGCATG
GCAGCACGTA AAACGCTGAT TGATCAACTG CGTGCCGACA TTGAATCTCA AGGTGGCAGT
GTATTACTGC TCTCGGGGGG TGACATCAAT ACTGGGGTAC CAGAATCAGA CCTACAAGAT
GCAGAGCCTG ATTTCAAAGG TATGAGCAAA ATCGGTTACG ACGCTATGGC GCTGGGTAAC
CACGAATTTG ATAATCCACT TGAAGTGCTG TTTAAGCAAA AAGAGTGGGC GAACTTCCCA
ATGCTGTCGG CCAACATTTA CGATAAAGCG ACCGGTAAGC GTCTGTTTGA ACCGTACCAT
ATCTTTGATA AGCAAGGGAT TAAGATTGCG GTTATTGGCT TAACCACCGA AGACACCGCG
AAAATTGGTA ACCCAGAATA CATCGGTGGT ATCGACTTCC GCGATCCGAA AGAAGAAGCG
AAGAAAGTGA TCGCTGAGCT GAAGAAAAAA GAGAAGCCGG ATCTTATCAT CGCAGTAACG
CACATGGGTC ACTACCAAAA CGGTGAGCAT GGTGTGAACG CTCCGGGTGA TGTTGCTTTG
GCGCGCTACT TGCCAGCGGG TGAGTTGGAT ATGATTGTCG GCGGTCACTC ACAAGAGCCT
GTGTGTATGG AAGGCCCTAA TCTGGTGAAA AAGAACTTTA AGCCGGGTGA CGAATGTAAG
CCTGATATTC AAAACGGCAC TTACATTGTG CAAGCTTACG AGTGGGGTAA ATACGTCGGT
CGTGCGGATT ATGAATTCCG TAACGGTGAG CTGAATATGG TCAGCTATAA CCTCATTCCC
GTTAACTTGA AGAAGAAAGT TGAAGTGAAT GGTGAAACTC AGCGTGTGTT TGCGACTTCT
GAAATTAAAG AAGACAGCGC AATGCTAGAG TTCCTGCGCC CATTCCAAGA GAAAGGCCAA
GAGCAACTGA GCATCAAAAT TGCCCACAGT AACGGTAAGC TAGAAGGCGA TCGTAACGTG
GTGCGTTTTG AGCAAACCAA CTTGGGCCGC ATGATTGCAA TGGCGCACAT GCAACGTGCT
AAAGCCGATT TTGCGGTAAT GAACTCTGGT GGCGTACGTG ATTCTATCCA AGCCGGTGAC
ATTACGTATA AAGATGTACT GAAAGTGCAG CCATTTGGCA ACATCGTCAG CTACGTGGAT
ATGAATGGTC AGGAAGTGCT GGATTATCTC AATGTCGTCG CTACCAAGCC GGTCGATTCA
GGTGCGTATG CCCAGTTCGC AGGGATTTCA ATGACGGTTG CGGATGGCAA AGTCTCTAAC
GTGGTCATCG GTGGCAAACA ACTGCGTCTC GATGCGACCT ACCGTTTCAC TGTGCCAAGT
TTTAACGCAG CGGGTGGTGA CGGTTATCCA AAAATTACTG ACCACCCAGG CTATGTCAAC
ACTGGCTTTG TGGATGCCGA AGTACTGAAA GATTACCTTG AGGCGAACAG TCCAATCGAT
GTGAACCGTT TCGCGCCAGC GGGCGAGATT GTTTATCGTT AA
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| Protein sequence | MKQGLILKSV LSAAIIASLA GCATAPAQQW EADKTYKLTI LHTNDHHGRF WQNQYGEYGM
AARKTLIDQL RADIESQGGS VLLLSGGDIN TGVPESDLQD AEPDFKGMSK IGYDAMALGN
HEFDNPLEVL FKQKEWANFP MLSANIYDKA TGKRLFEPYH IFDKQGIKIA VIGLTTEDTA
KIGNPEYIGG IDFRDPKEEA KKVIAELKKK EKPDLIIAVT HMGHYQNGEH GVNAPGDVAL
ARYLPAGELD MIVGGHSQEP VCMEGPNLVK KNFKPGDECK PDIQNGTYIV QAYEWGKYVG
RADYEFRNGE LNMVSYNLIP VNLKKKVEVN GETQRVFATS EIKEDSAMLE FLRPFQEKGQ
EQLSIKIAHS NGKLEGDRNV VRFEQTNLGR MIAMAHMQRA KADFAVMNSG GVRDSIQAGD
ITYKDVLKVQ PFGNIVSYVD MNGQEVLDYL NVVATKPVDS GAYAQFAGIS MTVADGKVSN
VVIGGKQLRL DATYRFTVPS FNAAGGDGYP KITDHPGYVN TGFVDAEVLK DYLEANSPID
VNRFAPAGEI VYR
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