| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1742 |
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| Symbol | |
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| ID | 5135642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1863894 |
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| End bp | 1864958 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533199 |
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| Product | putative permease PerM |
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| Protein accession | YP_001217681 |
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| Protein GI | 147673150 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAA TGGTCAGTCG TTGGTATAAG CGACGCTTCT CCGATCCACA CGCTGCCAGC
TTGGTGGCGA TTTTGTTGTT TGGTTTTATC ACCATCTACT TCTTTGGTCA TTTGATTGCC
CCTTTATTGG TGGCAATTGT ACTCGCCTAT CTGCTTGAGT GGCCCGTTAC TCAACTGCGT
CGATTACGAA TTCCGCGCAC CTTAGCGGTG ATCATTGTGA TTACGGTGTT CACTGGCTTG
ATGATTTTGG CGGTGTTTGG TTTGGTGCCA ACGATTTGGA AGCAGGTGGG GAATTTAATT
AACGACGTGC CGAATATGTA CAATGGTACG CAGAAATTCA TCACCAGTCT GCCTGAACGT
TATCCGGAAT TGGCACATCT AGAGATTGTC GAATCGGTAA TCGGTAATGC GAAAAACAAA
GTGCTAGGCA TGGGCGAATC GGTGGTAAAA GGTTCTCTTG CGTCTCTGGT CAGCTTAGCC
ACGCTAGGGG TTTATCTGAT TTTGGTGCCT CTATTAGTGT TCTTCTTGTT GAAAGATAAA
CAAGAGATGC TGCGGATGGC GAGTGGCATT TTGCCGCGTA ACCGCAAGTT GGCGAATAAA
GTTTGGGAAG AGATGAACCA ACAAATCTCC AACTACATTC GTGGCAAAGT GCTGGAGATT
GTTATCGTCG GCACAGTCAG TTACATCACG TTCGCGATTT TAGATCTGCG TTATTCCGTA
TTGCTGGCAG TCGCAGTCGG GCTTTCGGTA TTGATCCCTT ATATCGGCGC TGCAGCTGTA
ACCGTACCTG TTGCGATTGT GGCCTTGTTC CAATGGGGGC TGACCCCGCA GTTTTACACC
TTGTTGATTG CTTACGGCAT TATTCAGGCT TTGGACGGTA ACGTTTTAGT GCCCGTACTT
TTCTCTGAAG CGGTGAACCT ACACCCGGTT GCGATCATTA TTGCGGTACT CGTATTTGGC
GGATTATGGG GCTTCTGGGG CGTGTTTTTT GCGATCCCAT TAGCCACTCT CGTTAAGGCG
GTGTGGAAAG CCTTACCAAG TATTGATGAA GAGCCCGCTT CCTAA
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| Protein sequence | MFEMVSRWYK RRFSDPHAAS LVAILLFGFI TIYFFGHLIA PLLVAIVLAY LLEWPVTQLR
RLRIPRTLAV IIVITVFTGL MILAVFGLVP TIWKQVGNLI NDVPNMYNGT QKFITSLPER
YPELAHLEIV ESVIGNAKNK VLGMGESVVK GSLASLVSLA TLGVYLILVP LLVFFLLKDK
QEMLRMASGI LPRNRKLANK VWEEMNQQIS NYIRGKVLEI VIVGTVSYIT FAILDLRYSV
LLAVAVGLSV LIPYIGAAAV TVPVAIVALF QWGLTPQFYT LLIAYGIIQA LDGNVLVPVL
FSEAVNLHPV AIIIAVLVFG GLWGFWGVFF AIPLATLVKA VWKALPSIDE EPAS
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