Gene VC0395_A1735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1735 
Symbol 
ID5137894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp1857492 
End bp1858166 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content49% 
IMG OID640533192 
ProductVanY family protein 
Protein accessionYP_001217674 
Protein GI147675325 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCAG AGCAGCTGAC CGGGCAAACC GACACACATT TGATCTCCGT GATGGTCGGA 
CAAAAAGCGT TTCAAGTGCA TCCCCAAGTG AGTGCGGATC TTTTAGCACT CAAGCAAGCG 
GCGCAAGATG CAGGGTTTAA TCTTTGTATC GCCAGTGGTT TTCGCTCCTT TGAACGCCAA 
CTGGCGATCT GGAACCAGAA AATGCTCGGT CAAAAACCGC TGCTCGATGA ACATAGCCAG 
CCATTGCATA GCAACACACT GAGTGAAGCT GAAAAAGTGT TAGCCATATT ACGCTGGTCA 
GCCTTGCCGG GCGCAAGTCG TCACCATTGG GGAACGGATT TTGATGTGTA TGACCGCGAT 
GCTTTACCAG AGAACACCAG TCTGCTGCTT GAACCGTGGG AATATCTTGA AGGGCATCAA 
AGTGAGTTCT CTCAATGGCT AAACGCACAT CTTGCTCAAT TTGGTTTTTT CCTACCCTAT 
CAGCATGGTG AAGGCATTGG CTTTGAACCT TGGCATATCA GTCATAAACA GACTGCGCAG 
CAATGCTTAG CAGCACTAAG TGAGCCCCTA TTGCTTGAGC AGCTCTCTGC CGTAGCGATG 
GAAGGAAAAA CGACAGTCCA AGCGCTGTTG CCGGAGATTT ATCAGCGCTT CATCACGAAT 
ATTTGTGAGG CATAA
 
Protein sequence
MTPEQLTGQT DTHLISVMVG QKAFQVHPQV SADLLALKQA AQDAGFNLCI ASGFRSFERQ 
LAIWNQKMLG QKPLLDEHSQ PLHSNTLSEA EKVLAILRWS ALPGASRHHW GTDFDVYDRD 
ALPENTSLLL EPWEYLEGHQ SEFSQWLNAH LAQFGFFLPY QHGEGIGFEP WHISHKQTAQ 
QCLAALSEPL LLEQLSAVAM EGKTTVQALL PEIYQRFITN ICEA