Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1708 |
Symbol | fliN |
ID | 5135803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1831678 |
End bp | 1832094 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533165 |
Product | flagellar motor switch protein |
Protein accession | YP_001217647 |
Protein GI | 147674715 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGATGG CAAAAAGCGA AGATGAAAGA CTGGCCGAAG AATGGGCTGC CGCACTGGGG GAAGACCCTA ATGCGCCTGA TATTGATGTG GATGAAATCT TAGCCGCACC ACTTGAAGAG CTGAAAAACA CGGCGCCCCC AATTACGGAT GACGAGCGCC GTAAGCTCGA TACCATTATG GATATTCCGG TGACCATCTC GATGGAAGTC GGGCGCTCTA AAATCAGCAT TCGTAACCTG CTGCAATTGA ACCAAGGTTC GGTGGTGGAG TTGGATCGGA TTGCCGATGA GTCACTCGAT GTGATGGTTA ACGGCACGCT GATTGCGCAT GGCGAAGTGG TGGTGGTGAA CGATAAGTTT GGTATCCGCC TCACCGACGT GATAAGTCAA ACCGAACGTA TCAAGAAATT GAGATAG
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Protein sequence | MKMAKSEDER LAEEWAAALG EDPNAPDIDV DEILAAPLEE LKNTAPPITD DERRKLDTIM DIPVTISMEV GRSKISIRNL LQLNQGSVVE LDRIADESLD VMVNGTLIAH GEVVVVNDKF GIRLTDVISQ TERIKKLR
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