| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1702 |
|---|
| Symbol | flhB |
|---|
| ID | 5136446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1828195 |
|---|
| End bp | 1829325 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640533159 |
|---|
| Product | flagellar biosynthesis protein FlhB |
|---|
| Protein accession | YP_001217641 |
|---|
| Protein GI | 147674451 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
|---|
| TIGRFAM ID | [TIGR00328] flagellar biosynthetic protein FlhB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAGAAT CCGACGGACA AGAAAGGACT GAAGAAGCCA CGCCCCGAAG GTTGCAGCAG
GCCAAGGAAA AAGGCCAAGT TGCGCGTTCG AAGGAGTTGG CTTCTGTCTC GGTATTGGTA
GTAGGTGCGG TTTCCTTGAT GTGGTTTGGC GAGATCTTGG CCAAAGGATT GATGGTGGCC
ATGCAGCGCC TTTTTGAGCT AAGCCGTGAA GAGATTTTCG ATCTTGGTAA GCTGTTTGAC
ATCATTGGTG GCTCACTAGT CAACCTGCTG TTGCCCTTGC TCATGATCCT GAGCACCTTG
TTTATCGCTG CCTTAATCGG TGCGGCGGGG GTCGGTGGGA TCAGTTTTTC CGCTGAAGCG
GCGATGCCTA AGCTGTCGAA AATGAATCCG CTCAGTGGCT TAAAGCGAAT GTTTGGTATG
CAAAGCTGGG TCGAGCTGCT CAAATCCATC TTGAAAGTGT TGCTGGTGTC TGGCGTCGCT
TTTTATCTGA TTGAAGCTTC GCAAAAGGAT CTGTTCCAGC TCAGTCTTGA TGTGTATCCG
CAAAACATCT TTCATGCGCT GGATATTCTG CTCAACTTTG TGTTGCTGAT CAGTTGTTCG
TTACTGGTGG TGGTGGCGAT TGATATTCCA TTCCAGATTT GGCAGCACGC TGAACAACTG
AAAATGACCA AACAGGAAGT CAAAGACGAG TACAAAGACA CCGAAGGTAA ACCAGAGGTG
AAAGGGCGCA TTCGTATGTT GCAACGTGAA GCGGCGCAGC GACGTATGAT GGCTGCACTG
CCACAGGCCG ATGTCATCAT CACTAACCCT GAGCACTTTT CGGTAGCACT GCGTTATAAG
CAAAACACCG ATAAAGCGCC GGTGGTGATA GCTAAAGGTG TCGATCATAT GGCACTCAAG
ATCCGTGAAA TCGCGCGGGA ATATGACATT GCGATTGTTC CTGCACCGCC CTTAGCACGC
GCCTTGTACC ACACGACCGA GCTGGAGCAG CAAATTCCGG ATGGCCTATT CGTGGCCGTC
GCTCAAGTGT TGGCATTTGT GTTCCAGCTT AAACAGTATC GCCGCAAAGG TGGTCAGCGA
CCGAAACTCA ATGAGGAGAA TATGCCGATC CCACCGGATA TGCGTTACTA A
|
|---|
| Protein sequence | MAESDGQERT EEATPRRLQQ AKEKGQVARS KELASVSVLV VGAVSLMWFG EILAKGLMVA
MQRLFELSRE EIFDLGKLFD IIGGSLVNLL LPLLMILSTL FIAALIGAAG VGGISFSAEA
AMPKLSKMNP LSGLKRMFGM QSWVELLKSI LKVLLVSGVA FYLIEASQKD LFQLSLDVYP
QNIFHALDIL LNFVLLISCS LLVVVAIDIP FQIWQHAEQL KMTKQEVKDE YKDTEGKPEV
KGRIRMLQRE AAQRRMMAAL PQADVIITNP EHFSVALRYK QNTDKAPVVI AKGVDHMALK
IREIAREYDI AIVPAPPLAR ALYHTTELEQ QIPDGLFVAV AQVLAFVFQL KQYRRKGGQR
PKLNEENMPI PPDMRY
|
|---|
| |