| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1701 |
|---|
| Symbol | |
|---|
| ID | 5136772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 1827627 |
|---|
| End bp | 1828187 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640533158 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001217640 |
|---|
| Protein GI | 147673917 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA ACGATCACCG AATTACCCAT AACAAGAGCG ATAAAGATAA TCTTGACGAC
GATTTCTCAC TGTTTCGTGA CGAAGTAAAG GGCGTAAAAA AGTTGCGTCA GGATACCATA
CTCCACGCAC CAAACAGAAA TCCCAAGCAA AAAGAAATCC GCCGTACCGA GCGTGAAGCC
TCCGACAATG ATTTCTATTT TTCTGACGAG TTTATGCCTC ATCTGACCGA TGAAGGGCCG
ACCCGCTATG CGCGCAGTGA TGTCTCCAAG TACGAAGTGA AAAGGCTCCG CCGCGGTGTG
TATGTGCCCG ATGTGTTTTT GGATATGCAC GGCATGACTC AGCAAGAAGC AAAACGCGAA
TTGGGAGCGA TGATCGCCTA CTGCCTAAAG GAGAATGTGC ACTGTGCTTG TGTGCAGCAC
GGTATTGGCA AGCACATCTT GAAACAGAAC GTCCCACTCT GGTTGGCGCA GCACCCCGAT
GTGCTGGCGT TCCACCAAGC CCCACTTGAG TTTGGCGGTG ATGGCGCGCT ACTGGTACTG
CTGTCGATTC CTGAAAAATA G
|
|---|
| Protein sequence | MSKNDHRITH NKSDKDNLDD DFSLFRDEVK GVKKLRQDTI LHAPNRNPKQ KEIRRTEREA
SDNDFYFSDE FMPHLTDEGP TRYARSDVSK YEVKRLRRGV YVPDVFLDMH GMTQQEAKRE
LGAMIAYCLK ENVHCACVQH GIGKHILKQN VPLWLAQHPD VLAFHQAPLE FGGDGALLVL
LSIPEK
|
|---|
| |