Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1692 |
Symbol | pdxB |
ID | 5137254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1817897 |
End bp | 1819060 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533149 |
Product | erythronate-4-phosphate dehydrogenase |
Protein accession | YP_001217631 |
Protein GI | 147673968 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000010344 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGCAAA TTCCCACTAT GAAAATTCTG ATTGATGAGA ACATGCCTTA CGCTCAAGCG CTGTTTAGTC AGCTTGGCGA AGTGATCTTA AAACCCGGCC GTACCTTAAC CGCCGATGAT CTGATTGATG TCGATGCCTT AATGATTCGC TCAGTCACCA AAGTCAATGA AGCTCTCCTT GCTAAAGCGA ATCGCTTGAA GTTCGTGGGT ACCGCGACCG CGGGTATGGA CCATGTTGAC CAAGCTCTGT TAAGAGAGCG TGGCATCTTC TTCACGGCGG CTCCTGGCTG TAACAAAGTC GGTGTTGCGG AATACGTGTT CAGCGTGCTC ATGGTGCTTG CGCAGCAGCA AGGGTTCTCG GTTTTCGATA AAACGGTAGG CATCATCGGT GCTGGCCAAG TGGGTAGCTA TCTTGCGAAG TGTCTCTCTG GCATTGGCAT GAAAGTGCTG CTCAATGATC CGCCTAAGCA AGCGCAAGGG GATGAGCGAG AATTTACCGA GCTGGAAACC TTACTTAAAC AAGCAGATGT GATCACCCTG CATACGCCGA TTACCCGCGA CGGTGAGTGG CCAACCCATC ATCTGATTGA TGCGGCAATT CTTGAGCAAC TGCGCAGTGA CCAGATTTTA ATTAATGCGG CGCGTGGCCC TGTAGTGGAT AACGCGGCGC TGAAAGCGCG TTTACAGAAA GGCGATGGTT TTACCGCTGT ATTAGACGTG TTTGAGTTTG AACCGCAAGT GGATATGGAA TTGCTACCGC TGCTCGCATT TGCCACTCCG CATATTGCCG GTTATGGCCT TGAAGGTAAG GCGCGTGGTA CCACCATGAT TTTCAATAGC TACTGCGAGT TTCTTGGCAG TGCACACTGT GCAAACCCAG CAAGCTTGTT ACCCAAAGCG CCTGTGCCCA AAGTTTATCT AGACCGAGCA TGGGACGAGG AAACACTGCG TACGCTAACT CAAATTATTT ATGATGTGCG TAAAGATGAC GCACAGTTTC GCCGCGAGAT TCACCAACCC GGAGCGTTTG ACTTAATGCG CAAACACTAT TGGGATAGAC GTGAATACAG CGCGGTGACA CTAGCTGGAG GCGCTGATTG TCATTTGGCT CCTTTGGCTA AACTCGGTTT TCAAGTAGAG GTATGTGATG AGCCAACAAT TTAA
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Protein sequence | MPQIPTMKIL IDENMPYAQA LFSQLGEVIL KPGRTLTADD LIDVDALMIR SVTKVNEALL AKANRLKFVG TATAGMDHVD QALLRERGIF FTAAPGCNKV GVAEYVFSVL MVLAQQQGFS VFDKTVGIIG AGQVGSYLAK CLSGIGMKVL LNDPPKQAQG DEREFTELET LLKQADVITL HTPITRDGEW PTHHLIDAAI LEQLRSDQIL INAARGPVVD NAALKARLQK GDGFTAVLDV FEFEPQVDME LLPLLAFATP HIAGYGLEGK ARGTTMIFNS YCEFLGSAHC ANPASLLPKA PVPKVYLDRA WDEETLRTLT QIIYDVRKDD AQFRREIHQP GAFDLMRKHY WDRREYSAVT LAGGADCHLA PLAKLGFQVE VCDEPTI
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