Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1679 |
Symbol | |
ID | 5136678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1807600 |
End bp | 1808370 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640533136 |
Product | hypothetical protein |
Protein accession | YP_001217618 |
Protein GI | 147674477 |
COG category | [S] Function unknown |
COG ID | [COG0327] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00563581 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTACA AGATGAACAA TTTACAGCTA GAAGCGTTGC TAAATGAGAC ATTGTCCCCA CAGTTAATTA AAGATTATTG TCCTAATGGT TTACAAGTCG AAGGTAAAGT GGAAGTCAAA CGAATTGTCA CCGGTGTGAC CGCTAGCATG GCTTTAATTG AAGCTGCGAT TGAGTTGAAA GCTGATGCTC TTCTGGTTCA CCACGGCTAT TTTTGGAAAA ATGAACCCGA GGCCATTCGA GGTATGAAAG GTCGCCGGAT ACGTACGCTT ATCCAAAATG ATCTTAATCT GTATGCCTAC CATCTACCTT TGGATATTCA TCCACAGTTG GGCAACAATG CTCAGCTTGC GCAGCGACTC GGGATTTGCG TTGATGGTGG GTTGGAAGGG CATCCTCAAT CAGTTGCGAT GTTTGGGCAC TTTTTACAAC CGTTAACCGG AGAAGAATTA GCTCATCGGA TTGGCCAAGT CCTGAATCGT ACTCCTTTGC ATATTGCTCC CGATCAAGCC GATAAGCTGA TTGAAACTGT CGGTTGGTGT ACGGGTGGTG GGCAAGACTA TATTGAACTC GCGGCTAGCC GAGGTTTAGA TGCCTTTATT TCTGGAGAAA TCTCGGAGCG TACAACCTAT TCGGCACGTG AACAGTCGAT CCATTACTTT TCCGCAGGTC ACCATGCTAC CGAGCGCTAC GGAATTAAAG CACTAGGGGA ATGGCTCGCG GAAAATCACG GCTTTGATGT GACCTTCATT GATATTGATA ATCCAGTTTA G
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Protein sequence | MDYKMNNLQL EALLNETLSP QLIKDYCPNG LQVEGKVEVK RIVTGVTASM ALIEAAIELK ADALLVHHGY FWKNEPEAIR GMKGRRIRTL IQNDLNLYAY HLPLDIHPQL GNNAQLAQRL GICVDGGLEG HPQSVAMFGH FLQPLTGEEL AHRIGQVLNR TPLHIAPDQA DKLIETVGWC TGGGQDYIEL AASRGLDAFI SGEISERTTY SAREQSIHYF SAGHHATERY GIKALGEWLA ENHGFDVTFI DIDNPV
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