| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1674 |
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| Symbol | sdhB |
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| ID | 5137194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1802641 |
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| End bp | 1803351 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640533131 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_001217613 |
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| Protein GI | 147674178 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTCA ACTTCTCCTT ATATCGCTAT AATCCGGATG TCGATAACAA ACCCTACATG
AAAGACTACA TTCTTGAGGT AGAGGAAGGG TCTGACATGA TGGTGTTGGA TGCTTTGATT
CTGCTTAAAG AGCAAGATCC AAGTATTGCT TTCCGCCGCT CATGCCGTGA AGGGGTTTGT
GGCTCGGACG GTCTGAATAT GAATGGTAAG AATGGCTTAG CATGTATCAC ACCTTTGTCT
GCGTTAAAAG GTGACAAAAT TGTGATTCGT CCGCTGCCAG GATTACCTGT GGTTCGTGAC
TTGATTGTCG ACATGACTCA GTTTTACGAT AACTATGCGA AAGTTAAGCC TTTCTTGATT
GCAGATGATG CATTACCCCC TTCAAGAGAG AACTTGCAAT CCCCAGAAGA ACGGGCGCAT
TTGGATGGTC TGTACGAGTG TATTATGTGC GCTTGCTGTA CCACTTCCTG CCCTTCATTC
TGGTGGAATC CGGATAAATT TATCGGACCT GCAGGTTTGT TGGCTGCTTA TCGTTGGTTG
ATTGATAGCC GTGATACCGC GACAGATGAA CGCTTATCGA ATCTTGATGA TGCGTTTAGC
GTTTTTCGTT GCCACGGCAT CATGAACTGT GTCAGTGTTT GTCCGAAAGG ATTAAACCCA
ACGAAAGCCA TTGGACATAT TAAGTCCATG TTGATCAATC GTTCAGTTTA A
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| Protein sequence | MKLNFSLYRY NPDVDNKPYM KDYILEVEEG SDMMVLDALI LLKEQDPSIA FRRSCREGVC
GSDGLNMNGK NGLACITPLS ALKGDKIVIR PLPGLPVVRD LIVDMTQFYD NYAKVKPFLI
ADDALPPSRE NLQSPEERAH LDGLYECIMC ACCTTSCPSF WWNPDKFIGP AGLLAAYRWL
IDSRDTATDE RLSNLDDAFS VFRCHGIMNC VSVCPKGLNP TKAIGHIKSM LINRSV
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