| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1656 |
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| Symbol | flhF |
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| ID | 5137818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1775901 |
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| End bp | 1777388 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533113 |
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| Product | flagellar biosynthesis regulator FlhF |
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| Protein accession | YP_001217595 |
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| Protein GI | 147673602 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1419] Flagellar GTP-binding protein |
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| TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000227361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAATAA AACGATTTTT TGCCAAGGAT ATGAAAACTG CGCTGCTTCA GGTCAAAGAA
GAGCTGGGCG TGGATGCTGT GATCATGTCG AATAAAAAAG TCGCGGGTGG GGTCGAAATT
GTGGCAGCGG TTGATGGCGA TACTGCGCCC GCACCAGCCA AGCGTTACAA CTCGCAGCCT
AGACATGGTT ATAACCAAGT CTCACCCTCG GTCGCTCCGA CCAAGAGCAG AGAGCTGGCG
GATGACCGTG TCAGTTTGCA ATCGAGCGCC GACTCTGGCC GTTCTATGAC TCAACGCTTT
GCTAATATGC TCAAGCAATA CAGCTCGGCA GATGAGCAAG AGCATCGTGC GGAAAACGAA
GATTCGCTCT CTGCGCTGCT CAAGCGCCAG TCAGAAAATC GTGCGCCACA ACGTAATCAG
ACACAACGTA GTCAGAGTAG TTCAGAGCGT CAACGTCCTG ACTCTCCGCT CGGTAAGTTG
CTGCAAGAAG ATGCCGATGC ACGCCGTAAG CCTAGACTCG ATCCGACTCG TTATGATCGA
AAAGTGCCTG AAGAGCCGAT GGTCGCCGTC AGTGAATTAG AATCGATGCG TGAAGAGATG
ACCTCGATTC GCCGTTTGCT TGAGCATCAA GTTTCCGGAT TAATGTGGCA AGAAGTCGAG
CGTCGTGAGC CTCTGCGTGC CATGTTGATC AAACGCTTAG AGCGCATGGG TGTCTCTTTG
GAAATGGCGG ACCAATTGGC TTGCTATATC CCAGAGGAAA CGCCTCCTCC CAAAGCATGG
AAAGCATTGT TAGGTTTAGT CTCCGACCAA ATTCCAGTCG TCAAACACGA CATCCTAAAG
CGTGGTGGCG TGGTTGCCTT ACTTGGGCCA ACGGGGGTAG GGAAAACCAC AACCGTGGCT
AAATTGGCGG CTCGTGCAGC GATGGAATAC GGCTCTGACA ACGTCGCATT GGTGACCACA
GACACTTACC GTATTGGCGC CCATGAGCAA TTGTCGATTT ATGGCAGAAT TATGGGATGT
CCTGTAAGAG TTGCTAAAGA TTCCAACGAG TTAGCCGATG TAATCTATCA GCTGCGTAAT
CGTCGCCTGA TTTTAGTCGA TACCGCAGGG ATGGGACAAC GCGATGTTCG GTTGTCAGAA
CAGCTGGATA CCTTGATGCA AGAGAGCGGA GAGACTATCC ATAGTTACCT TGTTTTGCCT
GCGACCGCGC AGCGCAAAGT ATTACAAGAA ACCATTGAGC ATTTCAGAAG GATACCGCTT
TCTGGATGCA TTATGACCAA ACTCGACGAA TGTTTGAGCC TAGGCGAATT CGTCAGTGTG
GTTGTACAAA ATGCGTTGCC CGTCGCTTAC ATCGCGAATG GACAACGAGT GCCCGAAGAT
ATCGTAATCG CGCAACCCAA ATACATGGTC GCAAAGGCAA ACGAATTGCT AGAGAAGTCG
ACTGAAGATG AACCTCATTA CTGGACCAGT GATTCAGAGA GATTCTAG
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| Protein sequence | MKIKRFFAKD MKTALLQVKE ELGVDAVIMS NKKVAGGVEI VAAVDGDTAP APAKRYNSQP
RHGYNQVSPS VAPTKSRELA DDRVSLQSSA DSGRSMTQRF ANMLKQYSSA DEQEHRAENE
DSLSALLKRQ SENRAPQRNQ TQRSQSSSER QRPDSPLGKL LQEDADARRK PRLDPTRYDR
KVPEEPMVAV SELESMREEM TSIRRLLEHQ VSGLMWQEVE RREPLRAMLI KRLERMGVSL
EMADQLACYI PEETPPPKAW KALLGLVSDQ IPVVKHDILK RGGVVALLGP TGVGKTTTVA
KLAARAAMEY GSDNVALVTT DTYRIGAHEQ LSIYGRIMGC PVRVAKDSNE LADVIYQLRN
RRLILVDTAG MGQRDVRLSE QLDTLMQESG ETIHSYLVLP ATAQRKVLQE TIEHFRRIPL
SGCIMTKLDE CLSLGEFVSV VVQNALPVAY IANGQRVPED IVIAQPKYMV AKANELLEKS
TEDEPHYWTS DSERF
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