| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1644 |
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| Symbol | ccmB |
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| ID | 5136856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1765088 |
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| End bp | 1765756 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533101 |
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| Product | heme exporter protein B |
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| Protein accession | YP_001217583 |
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| Protein GI | 147673754 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCCTG CTTTTATTCA GTTTATTCAT CGTGAACTTT TAATTGCTTT TCGCCGTCAG
GCGGATGTGT TTAACCCTCT GTGGTTTTTT ATCATCGTGA TTACCCTGTT TCCGCTCAGT
GTGGGACCAG AACCTGCCTT GTTGGCACGA ATTGCGCCGG GGATTGTTTG GGTGGCCGCT
TTATTAGCGG CATTGCTCTC ATTGGAGCGT TTATTTCGTG ATGATTTTCA AGATGGTGCA
TTAGAGCAAG CGATGCTGAC ACCATTACCG CTCTCAGTGG TGGTACTGGC TAAGGTGACG
GCTCATTGGC TACTGACAGG CTTACCGCTG ATTTTAATTA GCCCACTACT GGCGATCTTG
CTTTCATTTG ATAGCTCAGC CTGGCTTGCG GTAGTGCTGA CTCTGTTGCT GGGGACTCCA
ACACTGAGTT TTATTGGGGC AATTGGGGTG GCACTCACCG TGGGTTTGCA AAAGGGTGGG
GTGCTATTGA GCTTATTGGT TTTGCCGCTC TTCATCCCTG TTTTGATATT TGCGACCTCG
GCGATTGATG CGGCGGCATT GGGAATGCCG TATAACGGCC AGCTTGCGAT TTTAGCGGCT
ATGCTCATGG GTTCGATGAC TCTAACGCCA TTTGCGATCA GCGCGGCGTT ACGAGTAAGT
GTGCATTGA
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| Protein sequence | MMPAFIQFIH RELLIAFRRQ ADVFNPLWFF IIVITLFPLS VGPEPALLAR IAPGIVWVAA
LLAALLSLER LFRDDFQDGA LEQAMLTPLP LSVVVLAKVT AHWLLTGLPL ILISPLLAIL
LSFDSSAWLA VVLTLLLGTP TLSFIGAIGV ALTVGLQKGG VLLSLLVLPL FIPVLIFATS
AIDAAALGMP YNGQLAILAA MLMGSMTLTP FAISAALRVS VH
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