| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1643 |
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| Symbol | ccmC |
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| ID | 5135141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1764245 |
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| End bp | 1764997 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533100 |
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| Product | heme exporter protein C |
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| Protein accession | YP_001217582 |
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| Protein GI | 147674659 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.961001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGAAAT GGCTTCATCC CTATGCCAAA CCTGATGCCG CTTACCAGCT GTGTGGTAAG
TTGTTGCCTT GGTTTGCCAG TTTAGGATTC CTGTTTCTTG CGGTAGGAAC GGTGCTCGGT
TTGGCCTATG CACCTGCGGA TTACCAACAA GGGGACAGTT TTCGAATCAT CTATATCCAT
GTTCCCGCAG CGATATGGTC GATGGGGGTT TACATGTCGA TGGCCATCGC CGCATTTATC
GGGATAGTCT GGCAACTGCG TATTTCGGAT ATGGCCGCGT TAGCCATGGC ACCCATCGGC
GCGGTGTACA CCTTTATTGC CCTTATCACT GGTGCTATTT GGGGCAAACC GATGTGGGGA
GCCTGGTGGG TGTGGGATGC GCGTCTCACC TCTGAGCTTG TTCTGCTGTT TCTCTATTTA
GGGGTTATTG CGCTTTATCA TGCGTTTGAT GACCAAAAAA CTGCGGCAAA AGCGGCGGGT
ATATTAGCCA TCGTCGGAGT GATTAACCTG CCTATCATTC ACTTCTCCGT TGAGTGGTGG
AACACCTTGC ACCAAGGTGC CACGATCACT AAGTTTGCCA AACCATCGAT CGCACCAGAA
ATGTTATGGC CACTGCTCGC TTGTATCTTG GGTTTTGCGT TCTTTTTTGC TGCATTGACC
ATGATCCGCT TACGCAATGA AATTTTGAGC CGAGAAAGCC ACCGTCCTTG GGTGAGTGAG
CTTGCCAACC AAACCGTGCG AGGAAATCGG TAA
|
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| Protein sequence | MWKWLHPYAK PDAAYQLCGK LLPWFASLGF LFLAVGTVLG LAYAPADYQQ GDSFRIIYIH
VPAAIWSMGV YMSMAIAAFI GIVWQLRISD MAALAMAPIG AVYTFIALIT GAIWGKPMWG
AWWVWDARLT SELVLLFLYL GVIALYHAFD DQKTAAKAAG ILAIVGVINL PIIHFSVEWW
NTLHQGATIT KFAKPSIAPE MLWPLLACIL GFAFFFAALT MIRLRNEILS RESHRPWVSE
LANQTVRGNR
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