| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1642 |
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| Symbol | ccmD |
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| ID | 5137357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1764039 |
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| End bp | 1764245 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640533099 |
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| Product | heme exporter protein D |
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| Protein accession | YP_001217581 |
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| Protein GI | 147673210 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.752809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATTTTG ACTCTTTCAG TGATTTTTTA GCGATGGGCG GTTATGCCGC TTACGTTTGG
AGTGCTTTCG GTTTGACTTA TCTTTCCATG GCGATGTTGT GGATCGTCAG CGTTCGACGC
AAAACCAAGT TACTCAACCA AGTGCGCGAT AAATTGGCGC GTCAGGCGCG TATTGATGCT
GCGAAACATA TGGAGAACAC ACTATGA
|
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| Protein sequence | MHFDSFSDFL AMGGYAAYVW SAFGLTYLSM AMLWIVSVRR KTKLLNQVRD KLARQARIDA
AKHMENTL
|
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| |