| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1641 |
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| Symbol | ccmE |
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| ID | 5137833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1763560 |
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| End bp | 1764042 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533098 |
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| Product | cytochrome c-type biogenesis protein CcmE |
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| Protein accession | YP_001217580 |
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| Protein GI | 147673770 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.509174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCAA GACGTAAAAA GCGGCTCGGT GTTGTTTTGG CCATTCTATT TGGCCTTAGC
GCGACCATTG GGCTCATCAT CTATGCCTTG AATCAGAATA TGGATCTCTT CTATACCCCG
ACTGAGCTCG TGTATGGCAA AGAGGGGAAA AAGCCGGAAA TCGGCCAGCG TTTACGTATT
GGCGGTATGG TGGTGGAAGG TTCGGTAAAA CGTGATCCGA ACTCATTGAA AGTCAGCTTT
GATCTACACG ATGTGGGACC AAGTATTACC GTGACCTATG ACGGTATTTT GCCCGATCTG
TTCCGAGAAG GTCAGGGTAT CGTAGCACAA GGGGTGTTAG TGGAGCCGAC CAAAATTGAA
GCGTTTGAAG TGCTGGCAAA GCATGATGAA AACTATATGC CACCAGAAAT TGCAGAGGCG
ATGAAAAAGA CCCACGCTCC ACTGCAATAC TCGCAAGAAC AGAAACAAGG AAGCGACCAA
TGA
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| Protein sequence | MNPRRKKRLG VVLAILFGLS ATIGLIIYAL NQNMDLFYTP TELVYGKEGK KPEIGQRLRI
GGMVVEGSVK RDPNSLKVSF DLHDVGPSIT VTYDGILPDL FREGQGIVAQ GVLVEPTKIE
AFEVLAKHDE NYMPPEIAEA MKKTHAPLQY SQEQKQGSDQ
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