| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1636 |
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| Symbol | vacJ |
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| ID | 5136357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1758546 |
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| End bp | 1759310 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533093 |
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| Product | vacJ lipoprotein |
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| Protein accession | YP_001217575 |
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| Protein GI | 147674073 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000058509 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCACATGG AATTACGTAT GGTTGGCCGC TTATCTTGGA TTACGCTATT CACACTTTTT
TTAGTTGGGT GCAGCAGTGC ACCTGATGAC TCCTCCCCTC ATTCGCAGGT GAACGATCCT
CTGGAAAGTT TCAACCGGCA AATGTGGACA ATTAACTATG ACTACCTAGA CCCTTATGTG
GTGCGTCCGG TCTCTCTATT TTATGTCGGT TATGTACCTA AGCCTGTACG CAGTGGCATT
GCCAACTTCC TCTCTAACTT AGACGAGCCT GCCAGCATGG TGAATAACCT GCTGATGGGC
AATGGGACAA AAGCGGTCGA TCACTTTAAT CGTTTTTGGA TTAATACCAG CTTTGGTTTA
CTCGGTTTGA TTGATATCGC TTCTGAAGCA GGCATCAAAA AATACGATGA TAAGGCGTTC
AGTGATGCGG TAGGCCATTA CGGTGTGGGC AATGGCCCCT ATTTAATGGT CCCAGGTTAT
GGTCCCTATA CGGTACGCGA AGTGACCGAT GTGGTGGATG GCATGTATTT CCCGCTTGCC
TATCTCAATA TCTGGGCTGG GGTCGGCAAA TGGGCACTTG AAGGCATGGA AACGCGCGCT
GCGTTAGTTT CGCAAGAGGC CTTATTACAA GACTCACCTG ATCCTTACAG TTTGGCTCGC
GATGCTTATC TCCAACGGCA AGCTTTCAAA GCGGAGATCC AAGTGGATGA CTATGACCCT
GAGGAAGAAG AGTATCTCGA TGAGTATTTA AATGAAGGGT TATGA
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| Protein sequence | MHMELRMVGR LSWITLFTLF LVGCSSAPDD SSPHSQVNDP LESFNRQMWT INYDYLDPYV
VRPVSLFYVG YVPKPVRSGI ANFLSNLDEP ASMVNNLLMG NGTKAVDHFN RFWINTSFGL
LGLIDIASEA GIKKYDDKAF SDAVGHYGVG NGPYLMVPGY GPYTVREVTD VVDGMYFPLA
YLNIWAGVGK WALEGMETRA ALVSQEALLQ DSPDPYSLAR DAYLQRQAFK AEIQVDDYDP
EEEEYLDEYL NEGL
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