Gene VC0395_A1633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1633 
Symbol 
ID5135479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp1756948 
End bp1757484 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content49% 
IMG OID640533090 
Producthypothetical protein 
Protein accessionYP_001217572 
Protein GI147674967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00000000889709 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGTTAT ATGGACATCA AGGGGAGAGT GTCATGCAAG TCCATACATT AGATAAAGCC 
GGTGTCATTA GCGAACTGCA TTTTGGCCAA GGAATTAGCC AAGCAGTGAC GCATGGGCGT 
CGTGCCGACT TTGCCTTACT CTTGGCCCTG TTCTCTAATG ATGTCCGTGA TAATACACCA 
GTAGATAAAA TTGAGGTTCC ACCGACAACG GAACAAGTAT TGCGTCAGCG TTTTGAACTC 
GCAGAGCCTC AACGCCTAGA AAATGATGAG AGCTCCTATC AAATCTCCGC CAGACAAGCC 
GCACTCTTTC ATCAAGGTGG CATGGCCAGT GCAAAGCTCA GCCACTATCT CACACCGGAA 
GTGCTTACTT ATCGTCCACA GGATACTCAA GGTTTGCCTG AAGAGGTGTA CTTGAACCTC 
TCAGGGCACG AACGGCGTCA CCTCGCGGAT AAACAACCCT CTACGCTATT GGCAAAAGAC 
TTTTATCATC GTCTCGCCAC CGCCTATCGC CAAGATCAAC TACGTACTGC TAGTTAA
 
Protein sequence
MPLYGHQGES VMQVHTLDKA GVISELHFGQ GISQAVTHGR RADFALLLAL FSNDVRDNTP 
VDKIEVPPTT EQVLRQRFEL AEPQRLENDE SSYQISARQA ALFHQGGMAS AKLSHYLTPE 
VLTYRPQDTQ GLPEEVYLNL SGHERRHLAD KQPSTLLAKD FYHRLATAYR QDQLRTAS