Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1612 |
Symbol | |
ID | 5136297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1731623 |
End bp | 1732147 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640533069 |
Product | hypothetical protein |
Protein accession | YP_001217553 |
Protein GI | 147675692 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000000408475 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGG TAAAAATACC GCGAACGGTT GATCCGGCTA AAGCCGCTCA GAAAAGATTA GACTTTGATG GCATCATCCA AGTTAATTTG TTCAAGCGCT TAGAGGAGTC AGTCGCAGGC GTTAAACGCG ACGCTGAAGT TTCATTGTCA TTTGAGATTG ATGAACAGCA ACTGGTTGTT ATCTCTGGTA AAGCTAACAT CGAAGTTGAT TTAGAGTGTC AGCGCTGTAA CGAGGTTTTC GCACACGAGT GTGAAGTTGA ATTTACTTAT ACCCCTTACT TAGGTCGTAA AAGTGAAGAA GACGCCCCAG ACGAGTATGA TTTGGTAGAT CTAAACGAGT TTGGTGAGGT TGACCTAGTT CAGTTAGTTG AAGACGAGTT CATCTTGAAT TTGCCTCAAG TTGCGATGCA TGACGAAGCG GATTGTAGCG TTGATTCAGA CAATTTGGTG TTTGGTGAAC TTCCAGAAGA AGTTTTGGAA GAGAAGCCGA ATCCATTCGA TGTTTTAAAA AGCTTGAAGA AGTAA
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Protein sequence | MQKVKIPRTV DPAKAAQKRL DFDGIIQVNL FKRLEESVAG VKRDAEVSLS FEIDEQQLVV ISGKANIEVD LECQRCNEVF AHECEVEFTY TPYLGRKSEE DAPDEYDLVD LNEFGEVDLV QLVEDEFILN LPQVAMHDEA DCSVDSDNLV FGELPEEVLE EKPNPFDVLK SLKK
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