Gene VC0395_A1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1612 
Symbol 
ID5136297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1731623 
End bp1732147 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content42% 
IMG OID640533069 
Producthypothetical protein 
Protein accessionYP_001217553 
Protein GI147675692 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000408475 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGG TAAAAATACC GCGAACGGTT GATCCGGCTA AAGCCGCTCA GAAAAGATTA 
GACTTTGATG GCATCATCCA AGTTAATTTG TTCAAGCGCT TAGAGGAGTC AGTCGCAGGC
GTTAAACGCG ACGCTGAAGT TTCATTGTCA TTTGAGATTG ATGAACAGCA ACTGGTTGTT
ATCTCTGGTA AAGCTAACAT CGAAGTTGAT TTAGAGTGTC AGCGCTGTAA CGAGGTTTTC
GCACACGAGT GTGAAGTTGA ATTTACTTAT ACCCCTTACT TAGGTCGTAA AAGTGAAGAA
GACGCCCCAG ACGAGTATGA TTTGGTAGAT CTAAACGAGT TTGGTGAGGT TGACCTAGTT
CAGTTAGTTG AAGACGAGTT CATCTTGAAT TTGCCTCAAG TTGCGATGCA TGACGAAGCG
GATTGTAGCG TTGATTCAGA CAATTTGGTG TTTGGTGAAC TTCCAGAAGA AGTTTTGGAA
GAGAAGCCGA ATCCATTCGA TGTTTTAAAA AGCTTGAAGA AGTAA
 
Protein sequence
MQKVKIPRTV DPAKAAQKRL DFDGIIQVNL FKRLEESVAG VKRDAEVSLS FEIDEQQLVV 
ISGKANIEVD LECQRCNEVF AHECEVEFTY TPYLGRKSEE DAPDEYDLVD LNEFGEVDLV
QLVEDEFILN LPQVAMHDEA DCSVDSDNLV FGELPEEVLE EKPNPFDVLK SLKK