| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1608 |
|---|
| Symbol | fabD |
|---|
| ID | 5137137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1728434 |
|---|
| End bp | 1729372 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640533065 |
|---|
| Product | malonyl CoA-acyl carrier protein transacylase |
|---|
| Protein accession | YP_001217549 |
|---|
| Protein GI | 147673966 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000000108664 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAA GATTTATGAG TAAGTTTGCT ATCGTATTTC CAGGTCAGGG CTCGCAAGCA
GTAGGTATGC TGGCTGACCT TGCCGAGCAG TATGCTGTGG TAAAACAAAC ATTCGCCGAA
GCTTCAGAAG TGCTTGGTTA CGATCTGTGG GCGCTGGTTC AAGATGGCCC TGTGGAAGAT
CTCAACCAAA CTTTCCGTAC TCAACCTGCG TTGCTTGCCG CCTCTGTTGC GATTTGGCGT
GTATGGCAGC AACTGGGTCT TGAGCAACCT GCGGTTTTAG CTGGTCACAG CTTGGGTGAA
TATTCAGCAC TGGTATGTGC GGGCGTGATT GATTTTAAAC AAGCGATCAA GCTGGTTGAG
CTGCGTGGTC AATTGATGCA ACAAGCGGTG CCTGCCGGTA CGGGTGCAAT GTACGCGATC
ATCGGTCTAG AAGATGAAGC GATTGCTAAA GCCTGTGCTG ACGCGGCGCA AGGTGAAGTG
GTTTCTCCTG TAAACTTTAA CTCACCAGGC CAAGTGGTTA TTGCTGGTCA AAAAGATGCG
GTTGAGCGTG CGGGCGTTCT GTGTAAAGAA GCGGGCGCGA AACGTGCGCT GCCTCTGCCA
GTTTCCGTAC CATCACACTG CGCGTTGATG AAGCCTGCTG CCGATGAATT GGCAAAAACT
CTAGCAGAGC TTGAATTCAA TGCACCACAA ATTCCGGTCA TCAATAACGT TGATGTTGTG
GCTGAAACGG ATCCGGTAAA AATTAAAGAT GCGTTGATTC GTCAACTCTA TAGCCCAGTT
CGTTGGACTG AATGCGTTGA ACAAATGAGC GCACAAGGTG TCGAAAAGCT GATTGAAATG
GGGCCGGGTA AAGTATTGAC TGGTCTAACA AAACGTATTG TAAAAACCCT AGAAGGTGTC
GCAGTCAATG ACGTGGCTTC TTTGGATGCG GTGAAATAA
|
|---|
| Protein sequence | MKERFMSKFA IVFPGQGSQA VGMLADLAEQ YAVVKQTFAE ASEVLGYDLW ALVQDGPVED
LNQTFRTQPA LLAASVAIWR VWQQLGLEQP AVLAGHSLGE YSALVCAGVI DFKQAIKLVE
LRGQLMQQAV PAGTGAMYAI IGLEDEAIAK ACADAAQGEV VSPVNFNSPG QVVIAGQKDA
VERAGVLCKE AGAKRALPLP VSVPSHCALM KPAADELAKT LAELEFNAPQ IPVINNVDVV
AETDPVKIKD ALIRQLYSPV RWTECVEQMS AQGVEKLIEM GPGKVLTGLT KRIVKTLEGV
AVNDVASLDA VK
|
|---|
| |