Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1603 |
Symbol | |
ID | 5136253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1723973 |
End bp | 1724989 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640533060 |
Product | hypothetical protein |
Protein accession | YP_001217544 |
Protein GI | 147674599 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0141578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTAAAA AGCGGGTATT GGTGTTGGTT GCTCTGATCG GTATTGTGGC AGGCAGCTAC TTTTATGTTG TTAAGCAGAT GGATCAGTAT CTGGCTCAGC CTTTGATGAT CCAAGAGGCT CAGCTCGTCA CGATCGCCTC AGGGACCACT CTCAGTCGAG AGCTGGCCCA GTTAACCGAA CAAGCTTGGA TCCAAGATAG CTTTGTTGCC GAATGGGTAC GTCGTTTTCA TCCTGAACTC TCCAAAATTA AGGCAGGAAC TTACAAGCTA CAACCTGATA TGTCTTTAGA GCAGGCTTTG GCGCTATTGG TTTCTGGTAA AGAGCATCAA TTTTCCATCA CCTTCGTGGA GGGCAGTCGT TTTCAAGAGT GGCGGGATAT CCTCGCAAGC AACGAAAACA TCACCCAGCA ACTGACGGGT CTGACTGAAA TCGATATTGC GAAGGCTTTA GGCATTGAGC ATGAAAAGCT GGAAGGTTTG TTTCTTGCCG AAACGTATCA TTTTACGAAA GGAACCAGCG ATGTAGAGAT CCTCAAACGA GCTAATCAGA AATTGGAAAA GTTTCTACAA GTGACTTGGG AGCATCGCCA AGAGGGACTG CCGATCCAGA CGCCTTATGA GGCCTTAATC CTTGCCTCGA TCATTGAAAA AGAAACCTCA ATTGCCGAGG AACGCGAACG CATTGCGGCC GTTTTCATTA ATCGTTTGAA TAAGCGCATG CGCTTACAAA CGGATCCAAC GGTGATTTAC GGGATGGGAG AGACCTACGA TGGCAATATC CGTAAGAAAG ATTTGCGTGC CCGTACACCA TATAACACTT ATGTGATCAA TGGGTTACCT CCAACGCCTA TCGCAATGCC CGGAGAAGCG TCAATTTATG CCGCACTCAA TCCTGAACAG AGTGATTATC TTTACTTTGT GGCAAGCGGT GAGGGTGGAC ACAATTTCTC TAAGACACTC GCAGATCATA ACCGTGCTGT GCGTGCTTAT CTCAAAAAAC TTAGAACAAA ACAATGA
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Protein sequence | MIKKRVLVLV ALIGIVAGSY FYVVKQMDQY LAQPLMIQEA QLVTIASGTT LSRELAQLTE QAWIQDSFVA EWVRRFHPEL SKIKAGTYKL QPDMSLEQAL ALLVSGKEHQ FSITFVEGSR FQEWRDILAS NENITQQLTG LTEIDIAKAL GIEHEKLEGL FLAETYHFTK GTSDVEILKR ANQKLEKFLQ VTWEHRQEGL PIQTPYEALI LASIIEKETS IAEERERIAA VFINRLNKRM RLQTDPTVIY GMGETYDGNI RKKDLRARTP YNTYVINGLP PTPIAMPGEA SIYAALNPEQ SDYLYFVASG EGGHNFSKTL ADHNRAVRAY LKKLRTKQ
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