Gene VC0395_A1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1601 
SymbolholB 
ID5136347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1722371 
End bp1723345 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content48% 
IMG OID640533058 
ProductDNA polymerase III subunit delta' 
Protein accessionYP_001217542 
Protein GI147674380 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.482029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTAATC TCAATTCTCT TTACCCTTGG TTAGTTCCCG TTTGGCAGCC TTGGCAAGCG 
GGATTAGCTG CAGGAAAAAT CTCGTCAGCG ACGTTAATTC AGGCATCAGA AGGAGTAGGC
GTTGAGAGTT TGGTTGAACT CATGGCCCGC ACCTTGATGT GTACGAGTAG CCAAAGTGAG
CCATGCGGTT TTTGCCATAG TTGCGGTCTA ATGCAATCGG GAAATCATCC CGACTTTCAT
GTTGTTAAGC CTGAAAAGAT CGGGAAATCG ATCACGGTGG AGCAAATTCG CCAGATGAAT
CGTATCGCCC AAGAGTCGTC CCAGCTCTCC GGTTATCGCT TGATTGTGAT TGAGCCTGCC
GATGCGATGA ATGAATCTTC CGCCAACGCG CTACTGAAAA CGCTCGAAGA GCCTGCACCA
AACTGTCTAT TTATTTTGGT TACCTCTCGG ATTAAGCATC TTTTGCCGAC GATAGTTAGC
CGTTGCCAAA GATTAGTGCT CCCTGCGCCA ACCACTGCGT TGGTGGTTGA GTGGCTAAAA
GGGCAGGGGA TCACGACGCC TGCTTACGCC TTACATCTTT GCGCAGATTC ACCGCTCAAA
ACCCGTGCCT TTATGCTAGA AGGGGGCGCG GAAAAATATC ATGAGCTTGA AAGCCAACTG
ATGAATGCGC TGAGTGGCGA TGTGAATGCG CAACTTAAAT GTATCGCACT CATCGATGCC
GATCTGACCA CGCATTTGTA TTGGGTTTGG TGTGTTTTGA CCGATGCGCA AAAAATTCAC
TTTGGTGTGC AGCAAGACTA TTATCCCCCA GCAAGTGCCG CATTAGCTGG CCGTTTTACC
TATTCTAAAC TTCATGTGCA GACAGCGAGC TTGGAAAGGC TGATGGAACA ATTGAACCAG
TTCAGTGGAT TGAATACAGA ACTGCTGTTG CTGCAATGGT TATATCAATT TAGTGATGAG
GAAACATGTT TGTAG
 
Protein sequence
MSNLNSLYPW LVPVWQPWQA GLAAGKISSA TLIQASEGVG VESLVELMAR TLMCTSSQSE 
PCGFCHSCGL MQSGNHPDFH VVKPEKIGKS ITVEQIRQMN RIAQESSQLS GYRLIVIEPA
DAMNESSANA LLKTLEEPAP NCLFILVTSR IKHLLPTIVS RCQRLVLPAP TTALVVEWLK
GQGITTPAYA LHLCADSPLK TRAFMLEGGA EKYHELESQL MNALSGDVNA QLKCIALIDA
DLTTHLYWVW CVLTDAQKIH FGVQQDYYPP ASAALAGRFT YSKLHVQTAS LERLMEQLNQ
FSGLNTELLL LQWLYQFSDE ETCL