Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1601 |
Symbol | holB |
ID | 5136347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1722371 |
End bp | 1723345 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533058 |
Product | DNA polymerase III subunit delta' |
Protein accession | YP_001217542 |
Protein GI | 147674380 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.482029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTAATC TCAATTCTCT TTACCCTTGG TTAGTTCCCG TTTGGCAGCC TTGGCAAGCG GGATTAGCTG CAGGAAAAAT CTCGTCAGCG ACGTTAATTC AGGCATCAGA AGGAGTAGGC GTTGAGAGTT TGGTTGAACT CATGGCCCGC ACCTTGATGT GTACGAGTAG CCAAAGTGAG CCATGCGGTT TTTGCCATAG TTGCGGTCTA ATGCAATCGG GAAATCATCC CGACTTTCAT GTTGTTAAGC CTGAAAAGAT CGGGAAATCG ATCACGGTGG AGCAAATTCG CCAGATGAAT CGTATCGCCC AAGAGTCGTC CCAGCTCTCC GGTTATCGCT TGATTGTGAT TGAGCCTGCC GATGCGATGA ATGAATCTTC CGCCAACGCG CTACTGAAAA CGCTCGAAGA GCCTGCACCA AACTGTCTAT TTATTTTGGT TACCTCTCGG ATTAAGCATC TTTTGCCGAC GATAGTTAGC CGTTGCCAAA GATTAGTGCT CCCTGCGCCA ACCACTGCGT TGGTGGTTGA GTGGCTAAAA GGGCAGGGGA TCACGACGCC TGCTTACGCC TTACATCTTT GCGCAGATTC ACCGCTCAAA ACCCGTGCCT TTATGCTAGA AGGGGGCGCG GAAAAATATC ATGAGCTTGA AAGCCAACTG ATGAATGCGC TGAGTGGCGA TGTGAATGCG CAACTTAAAT GTATCGCACT CATCGATGCC GATCTGACCA CGCATTTGTA TTGGGTTTGG TGTGTTTTGA CCGATGCGCA AAAAATTCAC TTTGGTGTGC AGCAAGACTA TTATCCCCCA GCAAGTGCCG CATTAGCTGG CCGTTTTACC TATTCTAAAC TTCATGTGCA GACAGCGAGC TTGGAAAGGC TGATGGAACA ATTGAACCAG TTCAGTGGAT TGAATACAGA ACTGCTGTTG CTGCAATGGT TATATCAATT TAGTGATGAG GAAACATGTT TGTAG
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Protein sequence | MSNLNSLYPW LVPVWQPWQA GLAAGKISSA TLIQASEGVG VESLVELMAR TLMCTSSQSE PCGFCHSCGL MQSGNHPDFH VVKPEKIGKS ITVEQIRQMN RIAQESSQLS GYRLIVIEPA DAMNESSANA LLKTLEEPAP NCLFILVTSR IKHLLPTIVS RCQRLVLPAP TTALVVEWLK GQGITTPAYA LHLCADSPLK TRAFMLEGGA EKYHELESQL MNALSGDVNA QLKCIALIDA DLTTHLYWVW CVLTDAQKIH FGVQQDYYPP ASAALAGRFT YSKLHVQTAS LERLMEQLNQ FSGLNTELLL LQWLYQFSDE ETCL
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