Gene VC0395_A1599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1599 
SymbolptsG 
ID5135281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1719739 
End bp1721241 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content48% 
IMG OID640533056 
ProductPTS system glucose-specific transporter subunits IIBC 
Protein accessionYP_001217540 
Protein GI147675620 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR02002] PTS system, glucose-specific IIBC component 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAACAT TTAGGCTACG GGGGTATGCC GTTAGTCCCA GCAATTCTAA TAACTTAATC 
AGGAGCATAA ACATGTTTAA GAACGCTTTT GCGAATCTGC AAAAGGTCGG TAAGGCGCTG
ATGCTGCCAG TATCAGTTTT GCCTGTCGCC GGTATTTTGC TAGGCGTGGG TGCCGCTAAT
TTTAGCTGGC TACCAGAAGT GGTATCACAT CTCATGGAAC AGGCGGGTGG TTCAGTCTTT
GGTCAAATGC CATTGCTATT TGCGGTCGGT GTTGCCCTAG GCTTTACTAA CAACGACGGT
GTATCTGGTC TGTCTGCTAT CGTCGGTTAC GGCATTATGG TTGCGACTTT AAAAGTCATG
GCAACTGTGA TGGGTGTGAG CGGCATCGAT ACTGGTGTTC TGGGTGGTAT CCTAGCCGGT
GGTGTTGCAG CTTGGTCATT CAACCGTTTC TACAAAATTC AACTGCCTGA ATATCTGGGT
TTCTTTGCAG GTAAACGTGC TGTTCCAATC ATCACGGGTT TTATTTCGAT TGCACTGGGT
GTGGTTCTGT CATTCATTTG GCCACCAATC GGTTCTGCGA TCGCCACTTT CTCTGACTGG
GCGGCAAACC AAGATCCTGT AACCGCATTT GGTATCTACG GTATCGTTGA GCGTTCACTG
ATCCCATTTG GTCTGCATCA TATTTGGAAC GTACCTTTCT TCTACCAAGC TGGTACTTGT
GTGAATGGTG CGGGTGAAAC CGTTAACGGC ATCATGACTT GCTTCCTAAC GGCTGACGAT
GCTTCTCGTG CGGCAGGCAA TGGCTTCGGT CAATTGGCAG GTGGCTATTT GTTCAAAATG
TTCGGTCTTC CAGCCGCTGC ATTTGCTATC GCTCACTGTG CTAAGCCTGA AAACCGTGCA
AAAGTAATGG GTATCATGGC TTCTGCTGCT CTGACTTCAT TCCTAACCGG TATTACTGAG
CCAATCGAAT TCGCATTCTT GTTCGTAGCT CCAGTACTGT ACGCTATCCA CGCTGTATTA
GCAGGTCTGG CTTACGTTCT GACTAACGCG CTGGGCGTGG TTCACGGTCA TACCTTCTCT
AACGGTTTCA TTGACTTTGT TGTTCAATCA CCACGTGCAG ATAACATGTT ACTGCTGGTT
GGCTTAGGCA TTGGCTACGC TGTGCTGTAC TACGTAGTAT TCACATTCGT TATCCGTGCT
CTTAACCTAA AAACACCAGG TCGTGAAGAC GAGAGCGCTG ATAAATCGGC ATCAAGCGGT
AATGAGCTGG CTGGTGATCT GGTTGCCGCA TTCGGTGGTA AAGCGAACAT TACTAACCTA
GATGCGTGTA TCACTCGTTT GCGTGTATCG GTAGCCGATA CTGCTCTGGT TGATCAGGAT
AAGCTGAAAA AGCTTGGTGC AGCAGGTGTG GTTATGGTTT CTGGTGGTGT ACAAGCTATC
TTCGGTACTA AATCAGACAA CCTGAAAACT GAAATGGATG AGTGGATCCG TAACAACGGT
TAA
 
Protein sequence
MLTFRLRGYA VSPSNSNNLI RSINMFKNAF ANLQKVGKAL MLPVSVLPVA GILLGVGAAN 
FSWLPEVVSH LMEQAGGSVF GQMPLLFAVG VALGFTNNDG VSGLSAIVGY GIMVATLKVM
ATVMGVSGID TGVLGGILAG GVAAWSFNRF YKIQLPEYLG FFAGKRAVPI ITGFISIALG
VVLSFIWPPI GSAIATFSDW AANQDPVTAF GIYGIVERSL IPFGLHHIWN VPFFYQAGTC
VNGAGETVNG IMTCFLTADD ASRAAGNGFG QLAGGYLFKM FGLPAAAFAI AHCAKPENRA
KVMGIMASAA LTSFLTGITE PIEFAFLFVA PVLYAIHAVL AGLAYVLTNA LGVVHGHTFS
NGFIDFVVQS PRADNMLLLV GLGIGYAVLY YVVFTFVIRA LNLKTPGRED ESADKSASSG
NELAGDLVAA FGGKANITNL DACITRLRVS VADTALVDQD KLKKLGAAGV VMVSGGVQAI
FGTKSDNLKT EMDEWIRNNG