| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1598 |
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| Symbol | |
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| ID | 5136266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1717943 |
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| End bp | 1719526 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640533055 |
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| Product | sodium-dependent transporter |
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| Protein accession | YP_001217539 |
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| Protein GI | 147673239 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGATA GAGCAAAAGT TGGCCGCGCA AATATTGTAC GGATAACTTT GCCTCCTTTT
CCCCCAGATT CAGCGACTGC TGACGAAAAG CTTCATACCC TAGGATATTA CAAGGAGTTG
TTTATGAAGC GAGAACAATG GGGATCCCGT GTTGGATTCG TATTAGCCGC CGTAGGGTCA
GCAATTGGCC TTGGTAACAT CTGGCGTTTC CCTTATATGG CCTATGAAAA TGGTGGGGGT
GCATTTTTCA TCCCTTATCT TTTCGCCATG GTCACTGCAG GCATTCCGTT TATGATCCTA
GAGTTCAGTA TGGGTCAGAA ACATCGGGGT TCAGCGCCAA CGACACTCGC CAAAATTCAC
TCAAAATTTG AGTGGTTAGG CTGGTTCCAA GTTGGGATCG CAGCCGTCAT TGCTGTTTAT
TATGTCGCAG TGATTGGTTG GGCTATTTCC TACTTTGGTA TGTCGTTTAC CCAGAGTTGG
GGCAGCGACA CTAACGCTTA TTTCTTCAGC GAATACCTGA AGTTAGGAGA TAACTCGCCC
ACAAATTTAG GCAGCATTCA ATGGCACATT GCATTTGCTA TGTTGATTGC TTGGGTCATC
ACTTATGTAG CCATTGTGGG TGGGGTTAAA AAAGGCATTG AACGTGCATC AAAAATCATG
ATGCCGATTC TATTTATCAT GGTGCTGATT CTGATCGCTC GCATGATCTT CCTACCCGGT
GCATTGGATG GCGTGAACTA TATGTTCCAG CCCGATTTCA GCAAAATCTG GGATGTAAAA
GTTTGGGCAG CCGCTTATGG GCAGATTTTC TTTACTCTGA GTATCGGCTT CGCAATCATG
CTAGCGTATT CAAGCTACTT ACCTGAGAAA TCCGATATTA CCAACAACGC CTTTATGACC
GTGTTGATCA ACTGTGGTTT CTCCGTACTG GCTGGGATCA TGATCTTTTC GGTATTGGGC
TATATGGCTC AAGAACAAGG AAAACCATTG ACGGAAGTCG TTTCAGCCGG TGTTGGTCTT
GCTTTTGTTA CCTTACCAGC GGCGATCAAC TTGTTGCCAA TCCCATACAT CTTAGGTCCT
TTGTTCTTCT TAGCCTTGGT TGTTGCAGGT TTGAGCTCAC ACATTTCCAT CATGGAAGCC
GTCACCTCTG CGCTGATTGA TAAGCTCGGT TGGAGCCGTA AGAAAGCCGC AAACATCGTT
ATTGGTATTG GCTTTTTAGT TTCCATGGCT TTTGCAACCA ATGGGGGCTT GCTACTACTG
GATTTGGTTG ACCACTTTGC GAACAACGTG GGCATCATGG CCAGCTGTTT GGTGGAACTG
GTATTGATGA CTTGGCTATT GAAGATTTCT GATGTTCGTA AATACGTCAA CAGCATCTCT
GATTTTAGCG TTGGGGTTTG GTTTGATATC TGCCTGCGCT TTGTTTCACC CGTTATCTTA
GCGATTATCG TCGCTACTAA ACTGCAAGCT CTCTTCACCG AAGGTTACGG TGGCTACGAT
TTAACACTTG GCTGGGCGAT TATCGCTGCG CTATTGGTGA TCGGGATTCT GATCAATGCA
AGCTCACGTA AGGAAGCATA CTAA
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| Protein sequence | MDDRAKVGRA NIVRITLPPF PPDSATADEK LHTLGYYKEL FMKREQWGSR VGFVLAAVGS
AIGLGNIWRF PYMAYENGGG AFFIPYLFAM VTAGIPFMIL EFSMGQKHRG SAPTTLAKIH
SKFEWLGWFQ VGIAAVIAVY YVAVIGWAIS YFGMSFTQSW GSDTNAYFFS EYLKLGDNSP
TNLGSIQWHI AFAMLIAWVI TYVAIVGGVK KGIERASKIM MPILFIMVLI LIARMIFLPG
ALDGVNYMFQ PDFSKIWDVK VWAAAYGQIF FTLSIGFAIM LAYSSYLPEK SDITNNAFMT
VLINCGFSVL AGIMIFSVLG YMAQEQGKPL TEVVSAGVGL AFVTLPAAIN LLPIPYILGP
LFFLALVVAG LSSHISIMEA VTSALIDKLG WSRKKAANIV IGIGFLVSMA FATNGGLLLL
DLVDHFANNV GIMASCLVEL VLMTWLLKIS DVRKYVNSIS DFSVGVWFDI CLRFVSPVIL
AIIVATKLQA LFTEGYGGYD LTLGWAIIAA LLVIGILINA SSRKEAY
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