Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1583 |
Symbol | |
ID | 5135562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1703630 |
End bp | 1704454 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640533039 |
Product | putative lipoprotein |
Protein accession | YP_001217523 |
Protein GI | 147674256 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000000549733 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTGA CTAAACCATT ACTTATTCTC GCAAGCCTAG TGCTGTTAAG TGGCTGTTTC GAGAATCGCA AGAACACCGA AAAGCTCTGT GCCGACAACC CCAATCTGCG CTGTGAACAG CTCAATATGG ATGATGGGCA ATGCCGCATT CCCAGAACCG ATCTGATATG GCACCGCTTT GAAATTTTGA AATCACCGAG CGATGAAAAA AGCATCAAAG AATACCATTT GGTCAGTGCT TATCGAAAAT GTCTTGAGCT TGCTTCGCAA ATCCAAGCGA TTGATCAAAC GAAGCTAAAA GAGAATCGCT TTAATGCTTT GGTCAATTCA GGCAAAGAGC AAGAACGTAT CGTGGCTGAA CTGAAACAAT CCAATTCACC ACAAGCACTC TATTTCTTGT GGAGTCAGAT TGGTGATCAC GCGGCGCGGC GTGCCTTTTT GCAGTTGGAA GGTAAGCCTG AATTAGAAAC GGCCGAGATG CAGTACGCCC TCGCCACTTT TTACACTGAC CGCGATAAAC CGAAAACCAT CGAGCTGCTG CATAAAACAC TTGAGCTCAG CAATGGTCAA CCCGTCAATA TTGAGATATT GAAAGCCTTA GCCAGTAACT ACCATGCTCT GCATGATAAA GAGCATGCTT ATCTGTGGGC AATGATTGGC AAAGAGTTTG GGGTTTCGGT TGCGTCCACA ACAGAAATGA AACGGCTTTA CGGTTTTAGC CAAGAGAAGT TTGCCGCATT GGATGATACT GCCAGCACGA TTGCTAAAAC GATCCGTAAC GGCAGTTACA CCAAGACTAC CCTGCCTAAA CCTAACGAAG GGTGA
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Protein sequence | MNLTKPLLIL ASLVLLSGCF ENRKNTEKLC ADNPNLRCEQ LNMDDGQCRI PRTDLIWHRF EILKSPSDEK SIKEYHLVSA YRKCLELASQ IQAIDQTKLK ENRFNALVNS GKEQERIVAE LKQSNSPQAL YFLWSQIGDH AARRAFLQLE GKPELETAEM QYALATFYTD RDKPKTIELL HKTLELSNGQ PVNIEILKAL ASNYHALHDK EHAYLWAMIG KEFGVSVAST TEMKRLYGFS QEKFAALDDT ASTIAKTIRN GSYTKTTLPK PNEG
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