| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1578 |
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| Symbol | fadH |
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| ID | 5135949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1697931 |
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| End bp | 1699985 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533035 |
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| Product | 2,4-dienoyl-CoA reductase |
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| Protein accession | YP_001217519 |
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| Protein GI | 147675393 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000245004 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAAGAA TATTCTGGTC AGACCATATC AATAAGAAGC AAAGTGAAGT CGCTATGTAC
CCAAATCTAT TTCAGCCTCT CGATCTTGGT TTTACTCAGC TCAAAAATCG TGTGTTGATG
GGCTCTATGC ATACTGGCTT AGAAGAAAAT AAGGAAGGGC TGCACAAGCT GGCGGCCTTT
TATGAAGAAC GTGCCAAAGG TGGCGTAGGC TTGATTGTGA CGGGTGGCTT TTCGCCTAAC
TTGCGCGGCC GTCTGCACCC ATTCAGCGCT GAATTTAGCA AAACTAAGCA TGCCAAAGCC
CATAAAGTGG TGACAGAAGC GGTGCACCGT CATGGCGCTA AAATCGCTTT GCAACTGCTG
CATGCGGGGC GTTATGCGAT GCATCCATTT TCACAAAGTG CTTCCGCGAT TCGTGCACCG
ATTGCCAAGT TTGCCCCGAG TGAAATGAGC ACTCGCCAAA TCCGCAATAC CATCCAAGAC
TTCGCCAATA GCGCCGAGCT TGCACAACTG GCGGGCTATG ATGGCGTCGA AGTGATGGGG
TCAGAAGGTT ATTTGATTAA CCAGTTCATC TGTAAGCGCA CCAACATGCG TTACGACGAG
TGGGGCGGCA GTTATCAAAA CCGCATTCGT TTTCCAGTTG AAATTGTTAA AGCTATCCGT
GAAGCGGTTG GCAAAGAGTT CATCATTATC TTTCGTCTGT CGATGCTCGA TTTGGTGGAG
CAGGGCAGCA CTTTTGAAGA GGTGGTGGTG CTTGCCAAAG CCTTAGAAGA GGCGGGGGTC
ACCATTATCA ATACCGGGAT CGGCTGGCAT GAAGCGCGTA TTCCCACAAT AGCGACCCAA
GTGCCGCGTG CCGCCTTTAG CTGGGTGACG GAGAAGATCA AACCCTATTT AAAAGTGCCT
GTCGTGACCT GTAACCGCAT TAACACGCCG GAGCAAGCGG AGAAAATTTT GGCGAGTGGT
CAGGCGGATA TGGTGTCGAT GGCGCGCCCG TTTTTAGCCG ATGCGGATTT TGTACGCAAA
GCGCAAGAAG GGCAGAGCGC GCTCATCAAT ACCTGTATTG GTTGTAATCA AGCTTGTTTG
GACAACGTCT TTCGTGGCAA ACGTGCCAGC TGCTTGGTGA ACCCGCGCGC TTGTTATGAA
ACTGAGATTG TGGTTAAACC CGCACAGAGC AAAAAAATTG CGGTTGTCGG TGCTGGCCCT
GCCGGTTTAG CGTTTGCGAC GACCGCTTCA GAGCGTGGTC ATCAAGTGGA TCTGTTTGAA
CGCAATGACA GAATCGGTGG CCAATTCCGT CTTGCGATGC AGATCCCCGG CAAAGAAGAG
TTTCGGGAAA CCATTCGCTA TTTTGCTAAC CGGATTGATC AAACTGGCGT GAAGTTGCAC
CTGGGTTGTG AAGTGCAATT TAGCGATCTG CGTGGCTACG ATGAAGTGGT GATCGCCACG
GGCGTGACAC CTCGCAAAAT CGCCCTAGCG GGGCTGAGTG AATCATCAAA AGTAGTTGAT
TACCAAACCT TAATTCGCGA AAAGACACCC GTAGGCCAAA AGGTCGCGAT TGTCGGCGCT
GGCGGTATTG GGGTGGATGT GGCGAGCATG CTCACCGAGC CGAAAGATCA AACTTTAGAT
GATTGGTTAT ACGAATGGGG GATTGATAAA GCCATCGAGC ACCCCGGCGG TTTGTACCCA
TATCCTGAGA CAACCAGTGA GCGTGAAGTC TGGCTGCTGC AAAGGCGCAA AGGCGCGGTG
GGTAAAGGGC CGGGTAAAAC CACGGGCTGG ATCCATAAAC GCACGTTAGA AAAACGCGGT
GTGCATTTGG TTGGTGGCGT GCAGTATCAG AAAATCGATG AGCAAGGTCT GCATATTGAG
CGTGATGGAA AATCAGAGCT GATTGATGCT GATAGTGTGG TGATTTGTGC AGGTCAAGAA
TCCGTGCGTC CTTTTGAGGC GCAGTGGGCT GAGCTGGGCG ATAAGCTGCA TGTGATTGGT
GGGGCGGATG TCGCCGGAGA GCTGGATGCT GCGCGCGCGA TTCGTCAAGG TGTGGAGCTG
GCAGTTCGAT TGTAA
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| Protein sequence | MARIFWSDHI NKKQSEVAMY PNLFQPLDLG FTQLKNRVLM GSMHTGLEEN KEGLHKLAAF
YEERAKGGVG LIVTGGFSPN LRGRLHPFSA EFSKTKHAKA HKVVTEAVHR HGAKIALQLL
HAGRYAMHPF SQSASAIRAP IAKFAPSEMS TRQIRNTIQD FANSAELAQL AGYDGVEVMG
SEGYLINQFI CKRTNMRYDE WGGSYQNRIR FPVEIVKAIR EAVGKEFIII FRLSMLDLVE
QGSTFEEVVV LAKALEEAGV TIINTGIGWH EARIPTIATQ VPRAAFSWVT EKIKPYLKVP
VVTCNRINTP EQAEKILASG QADMVSMARP FLADADFVRK AQEGQSALIN TCIGCNQACL
DNVFRGKRAS CLVNPRACYE TEIVVKPAQS KKIAVVGAGP AGLAFATTAS ERGHQVDLFE
RNDRIGGQFR LAMQIPGKEE FRETIRYFAN RIDQTGVKLH LGCEVQFSDL RGYDEVVIAT
GVTPRKIALA GLSESSKVVD YQTLIREKTP VGQKVAIVGA GGIGVDVASM LTEPKDQTLD
DWLYEWGIDK AIEHPGGLYP YPETTSEREV WLLQRRKGAV GKGPGKTTGW IHKRTLEKRG
VHLVGGVQYQ KIDEQGLHIE RDGKSELIDA DSVVICAGQE SVRPFEAQWA ELGDKLHVIG
GADVAGELDA ARAIRQGVEL AVRL
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