| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1575 |
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| Symbol | |
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| ID | 5135319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1694519 |
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| End bp | 1696459 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533032 |
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| Product | putative ATP-dependent helicase |
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| Protein accession | YP_001217516 |
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| Protein GI | 147673986 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.718112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAA AAACCTTTTC CCAGCAAGGC GCTTTAGGCC AAGCCATTCC GGGCTTTCAA
CCCAGACAAG CACAAGTCGA TATGGCGAAA GCGGTCGCCA GTGCTATCGC CAACCAATCT
CAATTAGTGG TTGAAGCGGG TACCGGAACC GGCAAAACCT TCGCGTATTT AGTGCCTGCG
CTGCTCAGTG GCAAAAAGGT GATCATCAGT ACCGGTTCTA AAAACCTGCA AGAGCAGCTT
TTCCATCGCG ATTTGCCTTT AATGGTCAGT GCATTAGGCT TTTTCGGCCA AGTCGCTTTG
CTCAAAGGGC GTGCAAACTA TCTCTGTCTT GACCGCTTAA GTCGGCAAAT GGTCGAAAGC
CATACCCCCG AATCTGATCC CACGCTGCTC ACTCAGCTGG TGAAAGTACG CAGCTGGGCA
TCCAGTACCC AGAGCGGCGA TTTAGGTGAA TGTGATGATT TGGCGGAAGA TAGCCTGATT
ATTCCCACCA TAACTTCGAC CAATGACAAC TGCTTGGGCA AAGAGTGCGC GAGCTACCAA
GACTGCTTTG TTTCCAAAGC GCGTCGTCGC GCGATGGATG CCGATGTGGT CGTGGTGAAC
CATCACTTGT TTCTGGCCGA TTTGGCGATC AAAGAGACGG GCTTTGGTGA GTTAATTCCG
GAAGCCGAAG TGTTTATTTT CGATGAAGCG CACCAACTGC CGGACATCGC GAGCCAATAT
TTTGGTCAGT CGGTATCGAG CCGACAAGTG CAAGAGCTGG CGAAAGACAT TGAACTCGGT
TATCGCACCG AAGCGAAAGA TATGCGCCAA CTGCAAAAAG TGTCGGACAA ACTGGTACAG
GCGGCAATGG ATTTACGCAT TGTGCTTGGT GAGCCGGGCT ATCGCGGTAA CTGGCGTGAA
GTGCTGAAAG TGCCGACCGT GGCAAGGGAA GTGGAACGGC TCAATGAAGC GCTGCAATTT
GCGCTGGATG TGCTCAAGCT GGCTTTGGGG CGCAGTCAGC TTCTGGATAC CGCGTTTGAA
CGTGCAACTT TGATCTTAGG CCGCATTCGC CGTGTGTGTG ATGTTTCTGT CACTGGATAT
TCCTATTGGT ATGACACCAC GCCGCGCCAT TTCAGTTTGC ACATTACCCC ACTGTCGGTA
GCAGATAAAT TTCGTGAACA GATTGCGCTA AAAGAGGGCG CGTGGATATT CACTTCCGCC
ACTTTAGCGG TCAACGAAGA TTTCAGCCAC TTTACTGAGC GGCTAGGGCT GACGCCGAGT
GCGCAGTTTT CGCTGGTCAG CCCATTTGAT TATCAGCAGC AAGCGGTCTT GTGCGTGCCG
CGCTATTTAC CCGAGCCGAA CAGTCCCGGC CTTGCTGAGA AACTGGTACG CATGCTCGCG
CCAGTGATCG AACATAACCA AGGGCGCTGT TTCTTTTTAT GTACCTCGCA CAGCATGATG
CGCGATCTAG GCGAGCGTTT TCGTGAACGT TTGACCTTGC CAGTGTTGAT GCAAGGAGAA
ACCAGTAAGC AGAAAACGTT GGCTGAATTT ATGGAGCTGG GCAATGCCCT GTTGGTCGCA
ACTGGTGCTT TCTGGGAAGG GATCGACGTG CGAGGCGACA CTTTAAGCTG TGTTATCATC
GACAAATTGC CGTTTACCGC ACCGGATGAC CCGTTGCTCA AAGCGCGGAT TGAAGATTGT
CGTTTGCGCG GTGGCGATCC ATTTGCGCAG GTGCAACTGC CCGAAGCGGT GATCACCTTA
AAGCAAGGTG TGGGGCGGCT GATCCGCGAT AAAAATGATA AAGGCGCGTT GATCATCTGT
GACAATCGAT TGGTCACGCG CGATTATGGT GGCGTGTTTC TCGCCAGTTT ACCGCCAATC
CCACGCACGC GGGATCTGGA CGTCGTCACC ACTTTTCTAC AACAATTAGC TATAACTGAA
ATCAATCAGA GAGACTCATG A
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| Protein sequence | MIEKTFSQQG ALGQAIPGFQ PRQAQVDMAK AVASAIANQS QLVVEAGTGT GKTFAYLVPA
LLSGKKVIIS TGSKNLQEQL FHRDLPLMVS ALGFFGQVAL LKGRANYLCL DRLSRQMVES
HTPESDPTLL TQLVKVRSWA SSTQSGDLGE CDDLAEDSLI IPTITSTNDN CLGKECASYQ
DCFVSKARRR AMDADVVVVN HHLFLADLAI KETGFGELIP EAEVFIFDEA HQLPDIASQY
FGQSVSSRQV QELAKDIELG YRTEAKDMRQ LQKVSDKLVQ AAMDLRIVLG EPGYRGNWRE
VLKVPTVARE VERLNEALQF ALDVLKLALG RSQLLDTAFE RATLILGRIR RVCDVSVTGY
SYWYDTTPRH FSLHITPLSV ADKFREQIAL KEGAWIFTSA TLAVNEDFSH FTERLGLTPS
AQFSLVSPFD YQQQAVLCVP RYLPEPNSPG LAEKLVRMLA PVIEHNQGRC FFLCTSHSMM
RDLGERFRER LTLPVLMQGE TSKQKTLAEF MELGNALLVA TGAFWEGIDV RGDTLSCVII
DKLPFTAPDD PLLKARIEDC RLRGGDPFAQ VQLPEAVITL KQGVGRLIRD KNDKGALIIC
DNRLVTRDYG GVFLASLPPI PRTRDLDVVT TFLQQLAITE INQRDS
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