| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1572 |
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| Symbol | |
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| ID | 5135656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1692870 |
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| End bp | 1693478 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533029 |
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| Product | putative outer membrane lipoprotein Slp |
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| Protein accession | YP_001217513 |
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| Protein GI | 147674501 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3065] Starvation-inducible outer membrane lipoprotein |
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| TIGRFAM ID | [TIGR00752] outer membrane lipoprotein, Slp family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.178723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCGCAGTT GCTTGGGGTC GATATCTACA TCTAAAACTG AGGTGAATTC GATGAAGATG
ACTGTGCTGA AATTACTCAT ACCTACCATG GCTCTGCTGC TGTCTGCTTG TGCGAGCTTG
CCACCTGAGT TGGGCAATCC CGATGATAAA AGCGTTGTGA CTCAATATTC GGCTTGGCTT
GAGCGCGATC CAGCTACGCA ATCACCCGTT CGAATGGGCG GCGTTGTTGC CAACATCAGC
AACCAAAAAG ATCGCACCCG CGTTGAGCTG GTCAACTTAC CGATTGATAG CGCAGGGCGT
CCCAACATCC ATCAAGAGCC GCAAGGTCGC TTTGTCGCTT ACGTGCCGGG ATTCCTAGAT
CCAATCACTT ATGGGGAAGG TCGCTTGCTC ACGCTTTATG GTACGACAGC GCCATCTGAA
CAAGGCAAAG TGGGTGACTA TGAACATACT TATCCGGTGA TGAATGCGCA AGGTTACCAT
TTGTGGCGAG TGGAAGAGCG AGTCGAAGTC GATGATATTG GGCCTTACAT GTTCCCTTGT
CGCGGTTTCT ACTGTTGGCC AAGGACGATG CCTGAGCGGG ACGGTAAGAT CATTCAAGAA
GTTAAATGA
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| Protein sequence | MRSCLGSIST SKTEVNSMKM TVLKLLIPTM ALLLSACASL PPELGNPDDK SVVTQYSAWL
ERDPATQSPV RMGGVVANIS NQKDRTRVEL VNLPIDSAGR PNIHQEPQGR FVAYVPGFLD
PITYGEGRLL TLYGTTAPSE QGKVGDYEHT YPVMNAQGYH LWRVEERVEV DDIGPYMFPC
RGFYCWPRTM PERDGKIIQE VK
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