| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1570 |
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| Symbol | fadD |
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| ID | 5137744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1690194 |
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| End bp | 1691894 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533027 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001217511 |
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| Protein GI | 147673701 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000352834 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATAAAC CTTGGCTTTC ACGTTATCCG AAAGACGTAC CGGAAACCAT TAATCCTGAT
CAGTACCCAT CACTGGTCGA AATGTTTGAA CAATCGGTAC ATAAGTACGC GGATCAGCCA
GCCTTCATGA ACATGGGCGC GGTGATGACA TTCCGTAAGC TGGAAGAGCG CAGCCGCGCC
TTTGCGGCTT ATTTACAAAA CGATCTCAAG CTGAAAAAAG GTGACCGTGT CGCTCTGATG
ATGCCGAACT TGCTGCAATA CCCTGTGGCG CTGTTTGGTG TTCTGCGTGC TGGCATGATC
GCAGTGAACG TCAACCCACT TTACACTCCG CGAGAGCTGG AGCATCAATT AAATGATGCG
GATGCGCGCG CGATTGTGAT CGTCTCAAAC TTTGCTAACA CCTTAGAGCA GATCGTTGCC
AATACACAGG TCAAGCATGT GGTGCTGACC AGTCTTGGAC AGATGCTGCC ACGCGCCAAA
GGCACAATTG TCGATTTCGT GGTGAAATAC GTCAAAGGCA TGGTACCTAA GTACGATCTA
CCGGGCGCGA TTTCGATGCG TAAAGCGCTG CACAAAGGCC GCCGTCTGCA ATACGTGAAG
CCGTTTATGT CCGGTGAAGA CATTGCCTTC CTGCAATACA CTGGCGGTAC AACCGGTGTG
GCGAAAGGCG CCATTCTGAC GCACCGCAAC ATGGTCGCAA ACGTGCTGCA AGCCAAAGGC
GCTTACGGCC CTGTGCTGCA AGAGGGTCGC GAGCTGGTGG TCACCGCACT GCCGCTGTAC
CACGTGTTTG CCTTAACCGT AAACTGCTTG CTGTTTATTG AAATGGGTGG CCGCAACTTA
TTGATCACTA ACCCGCGTGA TATACCGGGC TTTGTGAAAG AGCTGCAAAA GTACCCATTT
ACAGCCATTA CCGGTGTAAA CACCCTGTTT AATGCGCTGG TGAATAACGA AGATTTCCAC
GAGCTCGACT TCAAAAATAT GAAGCTAGCA GTTGGTGGTG GTATGGCGGT ACAACGCGCT
GTTGCCGAGC GTTGGAAAAA GACTACCGGT GTCCATTTGC TCGAAGGCTA TGGTTTGACC
GAGTGTTCGC CACTGGTGAC CGGCAACCCA TACGATTTGA CGGATTACAC GGGTGCGATT
GGTTTACCAG TACCGTCAAC CGAAGTGCGG ATTGTGGATG ATGCGGGTAA TGTGGTGCCT
AACGATCAAG TTGGTGAGCT GCAAGTGCGT GGTCCACAAG TCATGCAAGG TTACTGGCAG
CGTCCTGAAG CGACCAAAGA AGTGCTCAAT GCTGAGGGAT GGCTTTCAAC TGGCGATATT
GTGAAATTCG ATGATCAAGG TTTGATCCAC ATTGTTGATC GTAAGAAAGA CATGATTCTG
GTTTCAGGCT TTAACGTTTA TCCGAATGAA ATCGAAGATG TGGTGGCGCT GCACGGCAAA
GTGCTAGAAG TCGCAGCGAT TGGTCAGGCT AACGATGTTT CTGGCGAATT GGTGAAGATT
TATGTGGTGA AGCGCGACCC AAGCTTGACC AAAGACGAAG TGATTGCTCA CTGTCGTAAG
CATCTGACTG GCTACAAAGT GCCAAAACTG GTTGAATTTC GTGACGACCT GCCAAAAACC
AACGTGGGCA AAATCCTGCG TCGTGTGCTG CGTGAAGAAA ATGACGCACA GTTGGCAGCA
AAGGCGAAGC AAAGCGCATA A
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| Protein sequence | MDKPWLSRYP KDVPETINPD QYPSLVEMFE QSVHKYADQP AFMNMGAVMT FRKLEERSRA
FAAYLQNDLK LKKGDRVALM MPNLLQYPVA LFGVLRAGMI AVNVNPLYTP RELEHQLNDA
DARAIVIVSN FANTLEQIVA NTQVKHVVLT SLGQMLPRAK GTIVDFVVKY VKGMVPKYDL
PGAISMRKAL HKGRRLQYVK PFMSGEDIAF LQYTGGTTGV AKGAILTHRN MVANVLQAKG
AYGPVLQEGR ELVVTALPLY HVFALTVNCL LFIEMGGRNL LITNPRDIPG FVKELQKYPF
TAITGVNTLF NALVNNEDFH ELDFKNMKLA VGGGMAVQRA VAERWKKTTG VHLLEGYGLT
ECSPLVTGNP YDLTDYTGAI GLPVPSTEVR IVDDAGNVVP NDQVGELQVR GPQVMQGYWQ
RPEATKEVLN AEGWLSTGDI VKFDDQGLIH IVDRKKDMIL VSGFNVYPNE IEDVVALHGK
VLEVAAIGQA NDVSGELVKI YVVKRDPSLT KDEVIAHCRK HLTGYKVPKL VEFRDDLPKT
NVGKILRRVL REENDAQLAA KAKQSA
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