Gene VC0395_A1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1565 
Symbol 
ID5135261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp1685670 
End bp1686272 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content52% 
IMG OID640533023 
Producthypothetical protein 
Protein accessionYP_001217507 
Protein GI147673475 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0932097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTT ATTGTTCCGA GTGTGGTAAA GCGCGTAAAG CGTGCTTGTG TCCGTCCATT 
GTCGCGCTGG AAAGTGCGGT TGAGCTTATC ATTCTTCAGC ACCCAACGGA ACAAAAGCGC 
CCACTCGGTA CCGCGCGCAT TCTCAGCTTG TCATTGGCCA ATTGTCGGCT ATTGGTGGGC 
GAAGATTTTC GTGAGCATGA CGAGTTAAAC CAACTGCTGG CAGAGCCGGA TGTGGACTAC 
TATGTGCTTT ATCCGAATGA ACACGCGCAA GAGTGCACAA AGATAAGCCT CACGACAGCG 
CGCAAAACGC GGGTGATTTT GCTCGATGGG ACGTGGAAAA AAGCCTACAA GATGTGGCAA 
ATCAACACTC AACTGCATGA CTTACCGAGC CTACATTTGC CGGACGAGTG TGTTGGGCAT 
TACCGAATTC GTAAAGCGCC GGATGATACC GCGCTCTCCA CAGTGGAGGC GGGTTATCAT 
CTGCTCCAGC AGTGGCAACC TGAGCGTGAC TTCTCGCCAC TGCTCAAGGT GTTTGATGCC 
ATGATTCAAT ATCAGATCGA TCAGATGCCG GAAGGCGTTT TCGAGCGAAA TTACCGTCAG 
TAA
 
Protein sequence
MSRYCSECGK ARKACLCPSI VALESAVELI ILQHPTEQKR PLGTARILSL SLANCRLLVG 
EDFREHDELN QLLAEPDVDY YVLYPNEHAQ ECTKISLTTA RKTRVILLDG TWKKAYKMWQ 
INTQLHDLPS LHLPDECVGH YRIRKAPDDT ALSTVEAGYH LLQQWQPERD FSPLLKVFDA 
MIQYQIDQMP EGVFERNYRQ