Gene VC0395_A1564 details

Gene Information

• Locus tag: VC0395_A1564
• ID: 5136186
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 1683593
• End bp: 1684294
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640533021
• Product: hypothetical protein
• Protein accession: YP_001217505
• Protein GI: 147675646
• COG category: [R] General function prediction only
• COG ID: [COG1896] Predicted hydrolases of HD superfamily

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGTAGGC GAAGCAGGCT CTCTTTCGGT ACACTGAAGA GAGCCTGTTT TTTTATCTTC 
TTTTCAGCGT CATCGGCCGT TGAAAAGCCA ATCCATCAGC AAGGAAGTGA GAGTGCTATG 
CAAGAGAGCC ATTTTTTCGC CCACCTCGCG CGCATGAAAC TGATTCAGCG CTGGCCATTA 
ATGCGTTCCA TCTCCAGTGA AAATATTTCT GAGCACAGCC TGCAAGTCGC CTTTGTCGCT 
CATGCACTGG CGGTGATCAA AAACAAAAAA TTTGGTGGAA CGCTCAACCC TGAGCGCATT 
GCGCTGCTTG CCATGTATCA CGATACCAGT GAAGTGCTGA CCGGTGATTT GCCAACGCCC 
ATCAAGTATT TCAATCCCGA GATCGCTAAA GAGTACAAAA AAATCGAAGC GGCGGCCGAG 
CGGCGTTTAT TGGATATGCT CCCAGAAGAA CTGCGCGACG ATTTTCGCCC GTTTCTTATC 
TCCAATACGG CCGATCCCGA TGAAAGCGCC ATCGTTAAGC AAGCCGATGC GATTTGCGCG 
TATTTGAAAT GTTTGGAAGA GCTCAGCGCA GGTAACCACG AATACGCTCA AGCGAAAAAA 
CGCCTCGATG TGACGTTGCG TGAACGGCAC AGTGAGGAGA TGGCGTATTT TCTACAAACC 
TTTGCCCCGA GTTTTGAATT AACACTGGAC GAAATCAGCT AA 

 

Protein sequence

MGRRSRLSFG TLKRACFFIF FSASSAVEKP IHQQGSESAM QESHFFAHLA RMKLIQRWPL 
MRSISSENIS EHSLQVAFVA HALAVIKNKK FGGTLNPERI ALLAMYHDTS EVLTGDLPTP 
IKYFNPEIAK EYKKIEAAAE RRLLDMLPEE LRDDFRPFLI SNTADPDESA IVKQADAICA 
YLKCLEELSA GNHEYAQAKK RLDVTLRERH SEEMAYFLQT FAPSFELTLD EIS