| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1560 |
|---|
| Symbol | |
|---|
| ID | 5137590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1678331 |
|---|
| End bp | 1679122 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640533017 |
|---|
| Product | acyl-CoA thioester hydrolase YfbB |
|---|
| Protein accession | YP_001217501 |
|---|
| Protein GI | 147674495 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCTA ACCAACTGCA CTTTGCCAAG CCTACTGCGC GAACACCCTT GGTGGTGTTG
GTGCACGGTT TGCTTGGCAG TGGTGCGGAT TGGCAACCGG TTCTCTCTCA TTTAGCGCGC
ACTCAGTGCG CAGCATTGAC GCTGGATCTT CCCGGCCACG GCACAAATCC AGAACGGCAT
TGTGATAATT TTGCCGAAGC GGTCGAAATG ATCGAGCAAA CCGTACAAGC CCATGTTACT
TCTGAGGTGC CAGTCATTTT GGTTGGCTAT TCGCTCGGCG GGCGATTAAT CATGCATGGA
TTAGCGCAGG GGGCTTTTTC GCGTCTTAAT CTGCGAGGGG CGATCATCGA AGGTGGTCAC
TTCGGGCTGC AAGAGAATGA GGAAAAAGCA GCGCGTTGGC AACATGATCA GCAGTGGGCG
CAGCGCTTTA GTCAGCAACC GATTGAGCAT GTGTTGAGCG ATTGGTATCA ACAAGCGGTA
TTTAGTTCAC TAAATCATGA GCAAAGACAA ACTTTGATTG CGCAACGTAG TGCTAATCTT
GGTTCATCAG TAGCACATAT GTTACTGGCA ACAAGTCTGG CTAAGCAGCC CTATTTATTG
CCAGCGCTGC AGGCTCTTAA GCTCCCCATC CATTACGTGT GTGGTGAGCA AGACAGTAAA
TTTCAGCAAC TCGCCGAGAG TAGCGGGTTA AGTTACAGTC AGGTTGCGCA GGCGGGACAC
AATGTCCACC ACGAACAGCC GCAAGCGTTT GCCAAGATTG TACAAGCGAT GATCCACTCA
ATAATCGATT GA
|
|---|
| Protein sequence | MLSNQLHFAK PTARTPLVVL VHGLLGSGAD WQPVLSHLAR TQCAALTLDL PGHGTNPERH
CDNFAEAVEM IEQTVQAHVT SEVPVILVGY SLGGRLIMHG LAQGAFSRLN LRGAIIEGGH
FGLQENEEKA ARWQHDQQWA QRFSQQPIEH VLSDWYQQAV FSSLNHEQRQ TLIAQRSANL
GSSVAHMLLA TSLAKQPYLL PALQALKLPI HYVCGEQDSK FQQLAESSGL SYSQVAQAGH
NVHHEQPQAF AKIVQAMIHS IID
|
|---|
| |