| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1557 |
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| Symbol | menE |
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| ID | 5135485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1674948 |
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| End bp | 1676378 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640533014 |
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| Product | O-succinylbenzoic acid--CoA ligase |
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| Protein accession | YP_001217498 |
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| Protein GI | 147675543 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTCG GAATCTTCCC TGTGAGCCTT TGGCAGCCTT GGCTTGAGCG TGACCCCAAG
CAGGTTGCGC TGAGTCATGC TGGGCAAACC CTGACTTGGC AAGTATTAGA TAGCCAAGTA
GCGCACTACG CTAAAGCGCT GCGTGAGCAA GGGGTTCGGT CGGGGGAAGT GGTGACGCTG
GTCGGGAAAA ATCATCTGCA CACTGTGCTG TGGTTTTTGG CTTGTACTCA AGTGGGCGCG
CTGTGCACCT TTGTCGCACC ACAACCTTTA GCTCTTTTGC AGGAAAAGCT CGCCACACTC
TATGCCGAGC AAAGCCCGAA GCACCTTTGG CTAGCGCCTT CTTGCGCGCT GAGTGAAGAA
GAGATTGCGG AGCTTAATGC TCATCGCCTG AGTTTGCCCG ATGAGCGGGA TGAATCCGTT
GGTGGCGAGA AAGTCTCTAG CCAGTTTTCT TGTGAACAAC TGGCGACGTT AATTTTCACC
TCGGGTTCGA CGGGGACACC TAAAGCGGTG ACTCACACTC ATCAGCAACA TTTGGCTTCG
GCGCGCGGTT TACTGAACAA GTTTGCTTTT ACCGAGTCAG ACAGTTGGTT ACTGAGCTTG
CCGCTGTATC ATATTTCTGG TGTGGCCATT CTTTATCGTT GGCTTGCTGT CGGAGCGACA
CTCAAGATCG GCACTGGCGA TCTGCAAAAC GATATTGCTG GCGTCACTCA TGCTTCATTG
GTGCCTACTC AGCTTAAACG TCTGTTGGAC AGCAGCTCTC CATTGACGCT CAAACGTGTT
CTGCTCGGCG GCAGCCATAT CCCTGTTGAA CTCGCTCAAA TGGCGGCAAC GCGTGGTATT
GATACTTGGC TCGGCTATGG CATGACCGAA GCCGCCTCCA CCGTGACGGC AAAGCGGGTC
GATGGACTTG CAGGTAATGG TGAGCTTTTG GATCATCGTG AGCTGCGCCT TGTTGATGGG
CGGATTTTCA TTGCTGGGAA GACGTTGGCA CAAGGCTATT ATTGGCAAGG GCAGCTAGTT
CCGCTCACTA ATGAGCAGGG TTGGTTTGAC AGCAAAGATC TCGGTCGCTG GCAGGGCAAT
AACCTGTTGA TTGATGGCCG AGCGGATAAT CTTTTTATCT CTGGCGGTGA AAATGTTCAC
TGTGAAGAAA TAGAAGCGGT GTTAAACCAG CACCCTCATG TGCAAGTGGC GATCGTAATA
CCCGTTCAAG ATAGTGAGTT TGGTGCGCGA CCCGTCGCCG TGATTCGTAG TGAGGCCGAG
TGGTGTCAAG CCATCGGTGA TACTTGGTGC CAAGCTAAAC TCGAAAAATT CAAATGGCCT
ATCATGTACT TTTTACTCCC CGATGCTTTG CTGGATGGGG GAATTAAAGT CTCTCGTGCG
GCGGTGAAAG CGTGGTTGGC CGCCAACCAA ACGCAGTTCA CTCCGCTATA A
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| Protein sequence | MALGIFPVSL WQPWLERDPK QVALSHAGQT LTWQVLDSQV AHYAKALREQ GVRSGEVVTL
VGKNHLHTVL WFLACTQVGA LCTFVAPQPL ALLQEKLATL YAEQSPKHLW LAPSCALSEE
EIAELNAHRL SLPDERDESV GGEKVSSQFS CEQLATLIFT SGSTGTPKAV THTHQQHLAS
ARGLLNKFAF TESDSWLLSL PLYHISGVAI LYRWLAVGAT LKIGTGDLQN DIAGVTHASL
VPTQLKRLLD SSSPLTLKRV LLGGSHIPVE LAQMAATRGI DTWLGYGMTE AASTVTAKRV
DGLAGNGELL DHRELRLVDG RIFIAGKTLA QGYYWQGQLV PLTNEQGWFD SKDLGRWQGN
NLLIDGRADN LFISGGENVH CEEIEAVLNQ HPHVQVAIVI PVQDSEFGAR PVAVIRSEAE
WCQAIGDTWC QAKLEKFKWP IMYFLLPDAL LDGGIKVSRA AVKAWLAANQ TQFTPL
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