Gene VC0395_A1552 details

Gene Information

• Locus tag: VC0395_A1552
• ID: 5136733
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 1668960
• End bp: 1670840
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640533009
• Product: hypothetical protein
• Protein accession: YP_001217493
• Protein GI: 147675506
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
• TIGRFAM ID: [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.447419
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAGA TGGCAAACCC AACTACGGCT CTCTTAACTG AGCGCCGCTT TTTACCCTAT 
TTCATCACTC AGTTTCTTGG TGCCTTTAAC GACAACATTT TTAAAAATGT CTTGTTACTC 
TTTGTTGCGT TTGCAGGCCC TCAAGCGTTA CCTATCTCAA GCAATTTATT CATCAATCTC 
GCTGCTGGGC TGTTTATTCT GCCTTTTTTC CTCTTCTCTG CGACCGCGGG AGTCTTAGCG 
GATAAGCTAG AAAAGTCTCG GTATATTCGT TGGGTTAAAT TGCTTGAAAT CGCCATCATG 
CTGTGTGGTG CGATAGGTTT TATCACTCAA AGCTACGGAA TCTCACTGTT TTTATTGTTC 
TTGATGGGTA CACAATCGGC CTTTTTTGGC CCAGTGAAAT ACGCATTGCT ACCACAACAA 
CTGAAATCGG AAGAGCTCGT CCCCGGTAAT GCCTTAGTAG AAACCGGTAC TTTTCTGGCG 
ATCTTATTAG GCACCTTAGG GGCTGGACTG ATTGCTTCCG CTGATAACGC GCACTACTTC 
GCCGCGGCTG CGGTAGTGAT TTTCGCCGTG CTTGGTTATC TCTCTAGCCG CGCTATCCCA 
CTCGCACCTG CGAGTGCTCC TCATCTCGAA TTTCGTTGGC AGCCAATTAC GCAAACCAAG 
CAGACGCTCC GCATAGCCAA ACGTGATCGC GCCATTTTCC AGTCCATTAT GGCGATCAGT 
TGGTTCTGGT TTCTCGGCGC GGGGTACCTT ACTCAGTTTC CTAACTTCAC TAAACTGCAC 
CTCAACGGTA ATGAAGCCGC GGTCTCTTTC TTACTGGCGC TATTTTCCGT CGGCATTGCC 
GTCGGCTCAC TGGCGTGTGA CAAGCTTTCC GGACACCGGA TTGAGGTCGG CATTGTGCCC 
TTGGGCAGTG TGGGGATCAG CTTCTTCGGG TATCTGATGG CGACCAGCAT TCCCGCCGAT 
CTCCCCATTT TCAGTACTTT TGCGGATTTT GTTACTTACT CCGCGCTATG GCCACTATTT 
GCTTATTTAT TATTGATTGG CGTGTTTGGT GGCGTATTCA TCGTTCCGCT TTACGCCATG 
TTGCAGCAAC GCGCTAAAGT CACTGAACGT GCGCAAGTGA TCGCGGCTCT CAATATCTAC 
AATTCGCTGT TTATGGTCGG CAGTGCCGCA CTTGGCATTG TGTGCCTCAG TGTATTGGAG 
ATGAGTATTC CGCAGTTATT TGCACTACTG GCTGTGCTTA ACGTCTTGGT GGCTTTGTAT 
ATTTTCCTAC AAGTGCCGAT TTTTGCCGTT CGCTTTCTGG TGTGGATCCT CACTCATACG 
CTGTACCGAG TGCGCCATAA AAACTTGCAC CATATTCCAG AGCAAGGTGG CGCACTGCTG 
GTGTGTAACC ATGTCAGTTA TATGGATGCC CTATTGCTCA GTGCGGTTTG TCCGCGCTTA 
ATTCACTTTG TGATGGAAGA AGAGTACGCC AACCTGCCAC TGCTGAAACG TTTCTTGAAA 
CGCGCTGGGG TGATCCCGAT TTCTGCCAAC AACCGAGCCT CTCTTCGCCG CGCATTTGCG 
GATATTGAAC ACTCACTCAA CGAAGGGAAT TTGGTGTGCA TTTTCCCAGA AGGTCGACTT 
ACCGCCGATG GTGAAATGAA TCCGTTTATG CGTGGCTTAG ATTTAATCCT ACACCGCAGC 
CCTGTTCCTG TGGTTCCTCT GGCACTCAAA GGGTTATGGG GCAGTTATTT CAGCCGTTAC 
AAAGGCCGAG CTTGCCAAGG TGTGCCACGC CGTTTTCGCT CACAGTTAGA GATTGAAGCG 
GGAATGCCAG TTGCCCCGGA GCAAGCCAAC TCGGCGGTGA TGCACGAAAA AGTGGCACAA 
TTGCGTGGCG ATTGGCGTTA A 

 

Protein sequence

MNKMANPTTA LLTERRFLPY FITQFLGAFN DNIFKNVLLL FVAFAGPQAL PISSNLFINL 
AAGLFILPFF LFSATAGVLA DKLEKSRYIR WVKLLEIAIM LCGAIGFITQ SYGISLFLLF 
LMGTQSAFFG PVKYALLPQQ LKSEELVPGN ALVETGTFLA ILLGTLGAGL IASADNAHYF 
AAAAVVIFAV LGYLSSRAIP LAPASAPHLE FRWQPITQTK QTLRIAKRDR AIFQSIMAIS 
WFWFLGAGYL TQFPNFTKLH LNGNEAAVSF LLALFSVGIA VGSLACDKLS GHRIEVGIVP 
LGSVGISFFG YLMATSIPAD LPIFSTFADF VTYSALWPLF AYLLLIGVFG GVFIVPLYAM 
LQQRAKVTER AQVIAALNIY NSLFMVGSAA LGIVCLSVLE MSIPQLFALL AVLNVLVALY 
IFLQVPIFAV RFLVWILTHT LYRVRHKNLH HIPEQGGALL VCNHVSYMDA LLLSAVCPRL 
IHFVMEEEYA NLPLLKRFLK RAGVIPISAN NRASLRRAFA DIEHSLNEGN LVCIFPEGRL 
TADGEMNPFM RGLDLILHRS PVPVVPLALK GLWGSYFSRY KGRACQGVPR RFRSQLEIEA 
GMPVAPEQAN SAVMHEKVAQ LRGDWR