| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1548 |
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| Symbol | |
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| ID | 5135142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1666261 |
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| End bp | 1666752 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533005 |
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| Product | lipoprotein |
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| Protein accession | YP_001217489 |
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| Protein GI | 147675754 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG3015] Uncharacterized lipoprotein NlpE involved in copper resistance |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000337346 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA AAAGTATTTT TGCCCTGAGC GCGCTGACTC TCATTCTTGT CGGTTGCGAC
AACCAACAAG ACGCAAAAGT GGAAGTAGAA AAAGTCGTTG ATGTTGCGGC AGCACCTGCT
GAGCAATCTG CGGCTCAACC ATCAACAGCA AGCGTTGATG CAGCGCACAA TGCTCAAAAC
AGCCTAGATT GGGCTGGCAT CTATCAAGGC ACTCTGCCTT GTGCTGATTG CGGTGGCATT
GAAACAGAGC TGACGCTGAA CGCGGATGGC ACCTACGCGC TAACAGAAAA ATACCTCGAT
AAAGAAGGTG AACCTTTTGC CTCTCAAGGT ACTTTCGTTT GGAATGAAGC TGGCAACATC
GTAACACTGC AAACAGGCGA CCAAACTGGC AGACAATTCA TGGTGGGTGA AAACACGCTG
TCCCATCTGG ATATGGAAGG TAAGGTTATC GAAGGTGAGC TGGCTGAGTT TTACGTGCTA
AGCAAGCAAT AA
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| Protein sequence | MMKKSIFALS ALTLILVGCD NQQDAKVEVE KVVDVAAAPA EQSAAQPSTA SVDAAHNAQN
SLDWAGIYQG TLPCADCGGI ETELTLNADG TYALTEKYLD KEGEPFASQG TFVWNEAGNI
VTLQTGDQTG RQFMVGENTL SHLDMEGKVI EGELAEFYVL SKQ
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