Gene VC0395_A1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1546 
SymbolminD 
ID5135641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1664874 
End bp1665704 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content49% 
IMG OID640533003 
Productseptum site-determining protein MinD 
Protein accessionYP_001217487 
Protein GI147673790 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2894] Septum formation inhibitor-activating ATPase 
TIGRFAM ID[TIGR01968] septum site-determining protein MinD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000380987 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGGAA AAAATAACAT GTCGCGCATT ATTGTCGTCA CGTCAGGAAA AGGCGGGGTT 
GGCAAAACCA CCTCCAGTGC TGCAATTGCT TCAGGTCTCG CGCTGCGAGG CAAAAAAACC
GCTGTGATCG ATTTTGATAT CGGTCTGCGT AATCTCGATT TAATCATGGG CTGTGAGCGC
CGCGTGGTGT ACGATTTTGT CAATGTCATC AACGGTGAAG CAACGCTCAA CCAAGCCTTG
ATTAAAGACA AACGCAACGA AAACCTGTTC ATCCTGCCTG CCTCTCAAAC TCGTGATAAA
GATGCGCTAA CCAAAGATGG TGTACAGCGC GTGCTCAATG ATCTCAAAGA GATGGGTTTT
GACTTCATCA TTTGTGACTC ACCAGCTGGG ATTGAGCAAG GCGCGCTGAT GGCGTTGTAC
TACGCCGACG AAGCGATTGT CACCACCAAC CCTGAAGTAT CGTCAGTGCG CGACTCTGAC
CGTATTCTAG GCATTCTCGA TTCTAAATCG ATGCGGGCGG AACAAGGCCA AGCGCCGATC
AAACAGCATC TGCTGCTCAC TCGCTACAAC CCTGCACGCG TCACTCAAGG TGAAATGCTC
AGTGTGCAAG ACGTCGAAGA AATCCTACAT GTGCCGCTGC TCGGTGTGAT TCCAGAAAGC
CAAGCCGTAT TGAACGCCTC GAACAAAGGG GTTCCAGTAA TTTTTGACGA TCAATCCGAT
GCAGGCCAAG CTTATCAAGA TACGGTGGCA CGTCTACTTG GTGAACAAGT TGAGTTTCGT
TTCCTGACTG AAGCGAAGAA AGGTATTTTC AAACGCTTAT TCGGAGGTTA A
 
Protein sequence
MKGKNNMSRI IVVTSGKGGV GKTTSSAAIA SGLALRGKKT AVIDFDIGLR NLDLIMGCER 
RVVYDFVNVI NGEATLNQAL IKDKRNENLF ILPASQTRDK DALTKDGVQR VLNDLKEMGF
DFIICDSPAG IEQGALMALY YADEAIVTTN PEVSSVRDSD RILGILDSKS MRAEQGQAPI
KQHLLLTRYN PARVTQGEML SVQDVEEILH VPLLGVIPES QAVLNASNKG VPVIFDDQSD
AGQAYQDTVA RLLGEQVEFR FLTEAKKGIF KRLFGG