Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1546 |
Symbol | minD |
ID | 5135641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1664874 |
End bp | 1665704 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640533003 |
Product | septum site-determining protein MinD |
Protein accession | YP_001217487 |
Protein GI | 147673790 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG2894] Septum formation inhibitor-activating ATPase |
TIGRFAM ID | [TIGR01968] septum site-determining protein MinD |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000380987 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGGAA AAAATAACAT GTCGCGCATT ATTGTCGTCA CGTCAGGAAA AGGCGGGGTT GGCAAAACCA CCTCCAGTGC TGCAATTGCT TCAGGTCTCG CGCTGCGAGG CAAAAAAACC GCTGTGATCG ATTTTGATAT CGGTCTGCGT AATCTCGATT TAATCATGGG CTGTGAGCGC CGCGTGGTGT ACGATTTTGT CAATGTCATC AACGGTGAAG CAACGCTCAA CCAAGCCTTG ATTAAAGACA AACGCAACGA AAACCTGTTC ATCCTGCCTG CCTCTCAAAC TCGTGATAAA GATGCGCTAA CCAAAGATGG TGTACAGCGC GTGCTCAATG ATCTCAAAGA GATGGGTTTT GACTTCATCA TTTGTGACTC ACCAGCTGGG ATTGAGCAAG GCGCGCTGAT GGCGTTGTAC TACGCCGACG AAGCGATTGT CACCACCAAC CCTGAAGTAT CGTCAGTGCG CGACTCTGAC CGTATTCTAG GCATTCTCGA TTCTAAATCG ATGCGGGCGG AACAAGGCCA AGCGCCGATC AAACAGCATC TGCTGCTCAC TCGCTACAAC CCTGCACGCG TCACTCAAGG TGAAATGCTC AGTGTGCAAG ACGTCGAAGA AATCCTACAT GTGCCGCTGC TCGGTGTGAT TCCAGAAAGC CAAGCCGTAT TGAACGCCTC GAACAAAGGG GTTCCAGTAA TTTTTGACGA TCAATCCGAT GCAGGCCAAG CTTATCAAGA TACGGTGGCA CGTCTACTTG GTGAACAAGT TGAGTTTCGT TTCCTGACTG AAGCGAAGAA AGGTATTTTC AAACGCTTAT TCGGAGGTTA A
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Protein sequence | MKGKNNMSRI IVVTSGKGGV GKTTSSAAIA SGLALRGKKT AVIDFDIGLR NLDLIMGCER RVVYDFVNVI NGEATLNQAL IKDKRNENLF ILPASQTRDK DALTKDGVQR VLNDLKEMGF DFIICDSPAG IEQGALMALY YADEAIVTTN PEVSSVRDSD RILGILDSKS MRAEQGQAPI KQHLLLTRYN PARVTQGEML SVQDVEEILH VPLLGVIPES QAVLNASNKG VPVIFDDQSD AGQAYQDTVA RLLGEQVEFR FLTEAKKGIF KRLFGG
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