Gene VC0395_A1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1544 
Symbol 
ID5136528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1663731 
End bp1664039 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content43% 
IMG OID640533001 
Producthypothetical protein 
Protein accessionYP_001217485 
Protein GI147674473 
COG category[S] Function unknown 
COG ID[COG3100] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000390367 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCAATA ATCGAAATAA AAGGCTTGTC ATGCTTTGCT CTATTTACAA AAGTCCTAAA 
AAAGAAGGCA CTTATCTCTA TATTCCGAAA CGGGACGATT TTTCACAGGT CCCTGACACC
TTAAAACAGA TGTTTGGTAA ACCTATTTTT GTCATGCTGG TCAATCTTGA GCAGCGTCAG
TTGGCGCAAG TGAATGTGGA GAAGGTGAAA CAATCCATGC AGGAACAAGG TTTCTTTTTG
CAGTTACCGC CGCCACCAGA AAATTTGCTG GAACAACATA AGGAGCGCAA AGCGCGCCAA
ACTCCCTGA
 
Protein sequence
MVNNRNKRLV MLCSIYKSPK KEGTYLYIPK RDDFSQVPDT LKQMFGKPIF VMLVNLEQRQ 
LAQVNVEKVK QSMQEQGFFL QLPPPPENLL EQHKERKARQ TP