| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1543 |
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| Symbol | |
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| ID | 5137035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1662735 |
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| End bp | 1663706 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533000 |
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| Product | putative lytic murein transglycosylase |
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| Protein accession | YP_001217484 |
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| Protein GI | 147673674 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000590177 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAAT TATTATCGAT AGTACTGGGC CTAGCGTTAT CGGCACCCGT ACTCGCCAAT
GAAGTCAGTT TTGAACAATA TGTCGAAAGG CTAAAGCAGC AAGCGCGTGA AGAAGGTATT
TCCGAACGTA TCCTCAACGA AGCGTTTCGT GATGTGGAAT ACAAGCCTCG TTCCGTCGTT
GCGGATAAAA ATCAGCCAGA GAAAAAGTTG ACGCTGGATG AATACATCCC GCGCGCTGTA
CCAGAGTGGA AAGTAAAGCA AGCGCAATCT CTGTATGAAA AACACTACAC TGAGCTGCAA
CGCATTGGTA AGCAGTATGG AGTACAACCG AGATTTATTG TTGCCTTGTG GGGGGTTGAA
AGTAATTTCG GTGCGTTCAC GGGTAACTTT CGGGTGATTG ATGCGTTATC GACGCTGGCC
TATGAAGGCC GCCGTGAAGA GTTTTTCCGC AAAGAAACCA TGGCCGCCTT GCAGATCCTC
GAACAAGGTC ACATTGCCCC TGAAGCCATG AAAGGCTCTT GGGCGGGCGC GATGGGGCAG
TGTCAATTTA TGCCAAGCTC GTTTTTGAAT TTTGCCGCTG ATGGCAACGG TGATGGCAAA
AAAGACATTT GGGGAACACG TTCAGACGTA TTTGCTTCTA CGGCTAACTA TCTCAGCCAA
TCAGGCTGGG ATGATAAGTA CACTTGGGGA CGCCAAGTGA AAATCCCCAA AGGGTTTGAC
CATGCTCTAG AAGGACGTCA GCCTGAAAAA GGCAAAACGT TACAAGAGTG GAGTAAGCTT
GGGGTCACTC GTTATGATGG TAAACCGCTG CCAGCGCTTT CTGATGATAT TAAAGCGTGG
CTCATCATGC CTGATGATGA AGCAGGGCGA ATTTATCTTG TGTATAACAA CTACAATGTA
TTGATGAAGT GGAATCGCTC TCATTACTTT GCGTTGGCGG TCAGCCATCT GGCGGATCGG
ATTGCGTTCT AA
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| Protein sequence | MKKLLSIVLG LALSAPVLAN EVSFEQYVER LKQQAREEGI SERILNEAFR DVEYKPRSVV
ADKNQPEKKL TLDEYIPRAV PEWKVKQAQS LYEKHYTELQ RIGKQYGVQP RFIVALWGVE
SNFGAFTGNF RVIDALSTLA YEGRREEFFR KETMAALQIL EQGHIAPEAM KGSWAGAMGQ
CQFMPSSFLN FAADGNGDGK KDIWGTRSDV FASTANYLSQ SGWDDKYTWG RQVKIPKGFD
HALEGRQPEK GKTLQEWSKL GVTRYDGKPL PALSDDIKAW LIMPDDEAGR IYLVYNNYNV
LMKWNRSHYF ALAVSHLADR IAF
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