| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1529 |
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| Symbol | |
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| ID | 5136250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1643802 |
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| End bp | 1644464 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532987 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217472 |
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| Protein GI | 147673644 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC CCCTTTATGT GTTTGATTTG GATGACACCC TGATTGATGG GGACTGCGCA
ATGATTTGGA ATGCGTTTCT TGCTGAGAAA GGCATTGCGA CGGAGCGCAA TTTTGTGGAA
GAAGATCGAA GACGCATGGC GCTGTACGCG CAAGGCAAGA TGGATATGGC GGAATACATT
GCTTTTGCGA TGCAGCCATT AGCGCAAGTG CCAAGTACAA CCGTGCAAGA TTGGGTGGAA
GAGTGCGTGT CACGCTGGAT TGTTCCAAAA CAATTTGCCC AAGCTCGTGA GTTGATTGCG
CAGTTAAAGC AGCAAGGTAA TACCTGCTTA ATTATTTCCG CTTCTGTTTC GTTTTTAGTG
AAAACCGTCG CTCAACGTTT CGGAATTGAA CACGCGTTAG GGATTGATCT TGTGAGCCAA
AACGGTTGCT ACAGCGGTAA CATCGAGGGC GTTGCTAGCT ACCGAGAAGG TAAAGTGCTG
CGTTTACAAC AATGGTTAGC GGAGCAGAAT GAAACCTATC ACGACGTTCA TTTTTATACT
GACTCCATCA ATGATCTGCC GTTATGTCAG CATGCCGATT TCGCGTATGT GGTCAATCCC
TGCCCGCGCT TGAAAGCTCA GGCTGAGCAG CATGGTTGGC CCATATTATC TTGGGCGGTG
TAA
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| Protein sequence | MSKPLYVFDL DDTLIDGDCA MIWNAFLAEK GIATERNFVE EDRRRMALYA QGKMDMAEYI
AFAMQPLAQV PSTTVQDWVE ECVSRWIVPK QFAQARELIA QLKQQGNTCL IISASVSFLV
KTVAQRFGIE HALGIDLVSQ NGCYSGNIEG VASYREGKVL RLQQWLAEQN ETYHDVHFYT
DSINDLPLCQ HADFAYVVNP CPRLKAQAEQ HGWPILSWAV
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