Gene VC0395_A1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1528 
Symbol 
ID5136412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp1643135 
End bp1643755 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID640532986 
Producthypothetical protein 
Protein accessionYP_001217471 
Protein GI147675617 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGG CACTTTTGGG ACTCTTTATT CCCACCTTCT TTTTTGTTTC GATTACCCCA 
GGTATGAATA TGACCTTGGC CCTCACTCTG GGCATGAGCG TTGGCTATCG AAGAACACTA 
TGGATGATGG TAGGCGAACT ACTGGGTGTG GCTTTGGTCG CGGTCTCCGC AGTGGTAGGC 
ATTGCGGCGG TCATGCTGCG TTATCCAGAT ATCTTCACTC TGTTTAAAAT CGTGGGGGCA 
AGCTATTTGG TGTATTTAGG TGTGCAAATG TGGCGTTCAC GGGGCAAGCT GGCGATCAAT 
ATCGAGCAAG AAAACACGTA CCAAGGCAGT GACTGGGGTC TATTAGTACA AGGTTTTGTG 
ACCGCAATTG CTAACCCTAA AGGCTGGGCG TTTATGGTAT CCCTACTGCC CCCTTTTATT 
GATCAATCGT TAAGCCTTGC TCCACAACTG ACTGTATTGG TTGCCATTAT TCTGCTTTCC 
GAATTTATCA GCATGAGTTT GTATGCCACG GGTGGAAAAG GGTTAAAGCG CTTATTAAGC 
CAAGCTCACC ATGTCCGTTT ACTCAATCGG ATTGCAGGTT CGCTAATGGC TGGGGTGGGT 
ATCTGGCTCT ACTTTAGTTA G
 
Protein sequence
MNTALLGLFI PTFFFVSITP GMNMTLALTL GMSVGYRRTL WMMVGELLGV ALVAVSAVVG 
IAAVMLRYPD IFTLFKIVGA SYLVYLGVQM WRSRGKLAIN IEQENTYQGS DWGLLVQGFV 
TAIANPKGWA FMVSLLPPFI DQSLSLAPQL TVLVAIILLS EFISMSLYAT GGKGLKRLLS 
QAHHVRLLNR IAGSLMAGVG IWLYFS