Gene VC0395_A1526 details

Gene Information

• Locus tag: VC0395_A1526
• ID: 5136927
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 1641631
• End bp: 1642302
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640532984
• Product: hypothetical protein
• Protein accession: YP_001217469
• Protein GI: 147673855
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
• TIGRFAM ID: [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 50
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCGTA TTCTGAAAGT GCTGTTTTTC CTATTGATCG TTAAACCCTT AGTTTTTATT 
GGGTTAGGAC TCAATATTTT GCAGCGCCAA AATCTCCCTA CTCAAGGTCC AATGGTGATT 
GCCGCCAATC ACAATAGTCA TTTAGATACA CTCGTACTCA TGGCTCTGTT TCCGCTGCAT 
TTAATTCACC GAGTGCGCCC TGTCGCTGCA GCAGATTACT TTCTGGTGAA TCCCTTTGTG 
GCTTGGTTAT CTCTGAATAT TATTGGCATC ATTCCGATCC GTCGCTCCCC CTCCAGCAGT 
GAACGTGACG CGGTACTGCA AGCTTGCCAT GAAGCTTTAG ATCAAGGCGA TATTCTGATT 
ATTTTCCCAG AAGGGAGTCG TGGTGAGCCG GAAATAATGA GTGGTTTGAA AAAAGGCATT 
TATCATTTAG TCAAAAATCA CCCGGAGCGT GCGGTATTAC CTGTGGTCAT GCGTGGTTTA 
GGGCGCGCAC TACCCAAAGG TACGGCGATG TTCGTACCTT TCAATTGCGA TGTGGTGATC 
GGTGAACCGT TAACCGGTTT TAGTGATGCA GAACATTTCG TTCAGGTCAT GCAAAAAAAT 
TACCAGCAGT TGGCGACTCA CTGTATCACT CAAACCCAAG CGACTCTGGA TAGCGAAACC 
CTCGACAGCT GA 

 

Protein sequence

MARILKVLFF LLIVKPLVFI GLGLNILQRQ NLPTQGPMVI AANHNSHLDT LVLMALFPLH 
LIHRVRPVAA ADYFLVNPFV AWLSLNIIGI IPIRRSPSSS ERDAVLQACH EALDQGDILI 
IFPEGSRGEP EIMSGLKKGI YHLVKNHPER AVLPVVMRGL GRALPKGTAM FVPFNCDVVI 
GEPLTGFSDA EHFVQVMQKN YQQLATHCIT QTQATLDSET LDS