Gene VC0395_A1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1522 
Symbol 
ID5135546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1637459 
End bp1637929 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content43% 
IMG OID640532980 
Producthypothetical protein 
Protein accessionYP_001217465 
Protein GI147673221 
COG category[S] Function unknown 
COG ID[COG3915] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACAA TGAAGGTCAT GTTATTGACG CTGTTGGCGT TAATCAGCAG CAAATTGTTT 
GCACAAGAAC CGATCCTCAC GATAACCCAT CAAGGGCAAA CCGTTTCGGC CACTTATCAA
GAACTGTTAG CCCGCAGTGA TTTAACTATC GTCACCGAAA CACCGTGGAC ACAAGGTAAT
ACGGAGTTTA AAGGCATTTC TGCTCAGGCA TTATTAGCTT GGATGGGAGT AAAACAAGCC
GACCTTAAAG TGATTGCCCT AAACAAATAT TGGGCCGAAA TCCCTTATTC TGATATTGAG
AAGTACAACC CTGTTTTCGC GATTCAAAAT AATGGCAAAC CGATGCAGAT CCGTGACCGT
GGACCAATTT GGTCAATCTA TCCACTCAGT AGTAGTGGCG AGTTAGACAA TGAAATACTG
CACAGCCGTA TGGTTTGGCA GATCAGCAGT ATAGAAATCA TCACTCCTTA A
 
Protein sequence
MRTMKVMLLT LLALISSKLF AQEPILTITH QGQTVSATYQ ELLARSDLTI VTETPWTQGN 
TEFKGISAQA LLAWMGVKQA DLKVIALNKY WAEIPYSDIE KYNPVFAIQN NGKPMQIRDR
GPIWSIYPLS SSGELDNEIL HSRMVWQISS IEIITP