| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1519 |
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| Symbol | dctP-2 |
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| ID | 5137716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1634200 |
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| End bp | 1635198 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532977 |
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| Product | C4-dicarboxylate-binding periplasmic protein |
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| Protein accession | YP_001217462 |
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| Protein GI | 147675592 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCAAGC CGCTTACCCT AATTGCCGCT TCTATCCTCG CTGTCACAAG CTTTAATGCT
GCCGCTAATT GTGACCCAGG CGAAATCGTG ATCAAGTTCA GCCATGTGAC CAATACCGAC
AAACACCCGA AAGGGATTGC GGCATCACTG CTGGAAAAAC GCGTCAACGA AGAGATGAAC
GGTAAAGCCT GTATGCAGGT GTTCCCTAAC TCAACGCTGT ACGATGATGA CAAAGTGTTA
GAAGCCTTGC TCAACGGCGA CGTACAACTG GCGGCACCTT CGCTGTCTAA ATTTGAAAAA
TTCACCAAAA AGTACCGTAT TTTTGACCTG CCTTTCCTTT TTGAAGATGT GGATGCCGTT
GACCGTTTCC AAAGTTCCGC CAAGGGCGAA GAGCTGAAAA ATGCCATGAC TCGCCGTGGT
GTAAAAGGCT TGGAGTTCTG GCACAACGGG ATGAAGCAGA TCTCTGCCAA CAAGCCAATT
CTGGTGCCTG CGGATGCCAA AGGGTTGAAA TTCCGTGTAC AAGCGTCCGA TGTGTTGGTG
GCTCAGTTTG AGCAGATCGG TGCTAACCCA CAGAAAATGT CGTTTGCGGA AACCTACGGC
GGTTTACAAA CCAAAGTCAT TGATGGACAA GAAAATACTT GGTCAAACAT CTACGGACAA
AAGTACTTTG AAGTACAAGA TGGCACCACC GAAACCAACC ACGGCATTCT GGATTACCTC
GTGGTGACCT CAAGTAAATG GTGGGATGGC TTACCTGCAG ATGTTCGAGA TCAGTTTGCC
AAGATCCTCA ATGAAGTCAC GATTGAGCGC AACGCAGAAT CCAACAAAGT GGAAGAGCTC
AATAAGCAGT ACATCATTGA AGCGGGCGGT GTCGTACGCA CTCTGACTCC AGAGCAGCGT
CAGCAATGGG TCGATGCACT CAAACCGGTA TGGCAGAAGT TTGAGAAAGA CATCGGTGCT
GATCTGATTG AAGCCGCTCT GGCAGCTAAC CAGAAGTAA
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| Protein sequence | MFKPLTLIAA SILAVTSFNA AANCDPGEIV IKFSHVTNTD KHPKGIAASL LEKRVNEEMN
GKACMQVFPN STLYDDDKVL EALLNGDVQL AAPSLSKFEK FTKKYRIFDL PFLFEDVDAV
DRFQSSAKGE ELKNAMTRRG VKGLEFWHNG MKQISANKPI LVPADAKGLK FRVQASDVLV
AQFEQIGANP QKMSFAETYG GLQTKVIDGQ ENTWSNIYGQ KYFEVQDGTT ETNHGILDYL
VVTSSKWWDG LPADVRDQFA KILNEVTIER NAESNKVEEL NKQYIIEAGG VVRTLTPEQR
QQWVDALKPV WQKFEKDIGA DLIEAALAAN QK
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