| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1516 |
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| Symbol | dctD-1 |
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| ID | 5137785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1630640 |
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| End bp | 1631980 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532974 |
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| Product | C4-dicarboxylate transport transcriptional regulatory protein |
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| Protein accession | YP_001217459 |
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| Protein GI | 147673614 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGATG TATTTTTGAT TGATGATGAG AGCGATATCC GCATTGCGCT CGCTCAAAGT
TTCGAATTGG CCGACCTCAA CGCGCAGTTT TTTGCCAGTG TCGAAGAGGC ACTGCTGGCA
ATCAAGGCGC AAGGACTCCC ATTGGTGATC GTCAGTGATA TCTGCTTACC CGGTTTAAGT
GGACAGAATT TACTGAGCTC CGTATTGCAT CAAGACAGTG AACTGCCTGT CATTCTTATC
ACTGGACATG GCGATATTTC GATGGCGGTC AAAGCGATGC ATGATGGTGC TTACGATTTT
ATTGAAAAGC CCTTTGCGCC TGAGAGGTTG ATTGACACGG TGCACCGTGC CATCGAAAAA
TGTCGCCTTA CTTTGGAAAA CCGTCAGCTA AAACGCAGTT TAAAAGTCAG CCAAACCCTA
GGCCCGCGAA TTATTGGTGA AACCGCCGCC ATTCAAACTC TGCGCGATAC CATTGCCCAA
GTGGCGGATA CCCAAGCGGA TATTTTATTG TTTGGTGAAA CAGGAACCGG CAAGGAGTTG
GTTGCCCGTT CACTGCATGA ACAGAGCTCG CGCCGTGAAC AGAATTTTGT TGCGATTAAC
TGTGGTGCGG TGCCGGAGAA CTTGATTGAG AGCGAGCTGT ACGGCCATGA AAAAGGCGCG
TTTACGGGGG CAGACAGCCG TCGAGTGGGT AAGTTTGAGC ATGCTCAAGG TGGCACTCTG
TTTCTGGATG AGATTGAATC GATGCCGATG CAAGCGCAGA TCCGTCTGCT GCGTGTGCTG
CAAGAGCGAG TGATCGAACG GATTGGCTCG AATGAACTCA TTCCCCTTGA TATTCGGGTG
ATTGCCGCCA CTAAAATCGA TTTAAAACAA GCCGCTGCCG AAGGGAAATT TCGGCAAGAT
CTCTACTATC GGCTCAACAT TGTCACCTTA ACGATCCCAC CGCTGCGTGA GCGCAGAGAG
GACATTCCTG CCCTTTTCCA CCATTTCTTA CTGGTCGCTG CCGCACGTTA TGGTAAAGCG
GCTACAGCAC TGACGGCCTC CGATGTGCAA AGCTTGCTTA GTCACGATTG GCCGGGCAAC
GTGCGGGAAT TGCGTAATGC CGCAGAGCGC TACGTGTTAC TCGGTAAGTT GGCGCAATTT
GCTGAAAGCC ATGAGCCAAA ATCCAAATTA CTCGGACTGA ATGAACAAGT CGCGGAGTTT
GAGAAGTCAA TTTTGGAGCA GACGCTGATT GAGTGTGGTG GCAGCATTAA AGCCACCATG
GAGCGTCTCC ACCTTCCACG TAAAACCTTG TATGACAAAA TGCAGAAATA TCAGCTCGAT
AAAGAGAGTT ACAAACCCTG A
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| Protein sequence | MCDVFLIDDE SDIRIALAQS FELADLNAQF FASVEEALLA IKAQGLPLVI VSDICLPGLS
GQNLLSSVLH QDSELPVILI TGHGDISMAV KAMHDGAYDF IEKPFAPERL IDTVHRAIEK
CRLTLENRQL KRSLKVSQTL GPRIIGETAA IQTLRDTIAQ VADTQADILL FGETGTGKEL
VARSLHEQSS RREQNFVAIN CGAVPENLIE SELYGHEKGA FTGADSRRVG KFEHAQGGTL
FLDEIESMPM QAQIRLLRVL QERVIERIGS NELIPLDIRV IAATKIDLKQ AAAEGKFRQD
LYYRLNIVTL TIPPLRERRE DIPALFHHFL LVAAARYGKA ATALTASDVQ SLLSHDWPGN
VRELRNAAER YVLLGKLAQF AESHEPKSKL LGLNEQVAEF EKSILEQTLI ECGGSIKATM
ERLHLPRKTL YDKMQKYQLD KESYKP
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