Gene VC0395_A1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1513 
Symboltig 
ID5137233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1627044 
End bp1628345 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content48% 
IMG OID640532971 
Producttrigger factor 
Protein accessionYP_001217456 
Protein GI147673079 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 
TIGRFAM ID[TIGR00115] trigger factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000677902 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTTA CTGTTGAAAC GCTAGAAGGC CTACAGCGCC GTCTGAATAT TACTGTTCCA 
GCTGCAAACA TCGAAGACGC TGTAGCAGCT GAATTACGCA ACATCGCGAA AAACCGTCGT
TTCGATGGTT TCCGTAAAGG CAAAGTGCCA ATGAAGATGG TTGCGAAAAT GTACGGCAAA
GCAGTACGTC AAGACGTGCT GGGTGAAGTG ATGCAACGCC ACTTCATCGA AGCGATCGTA
AAAGAGAAAA TCAATCCAGC TGGCGCACCA ACGTTTGCTC CAGTTGAAAT TGGCGAAGGC
AAAGATCTGG TTTTCACAGC AACATTTGAA GTTTACCCAG AAGTTGAACT GAAAGGCCTA
GAAAACATCG CAGTAGAGAA GCCAGCAGCA GAAGTGACTG ACGCTGACGT AGCAGAAATG
CTGGAAACTC TGCGCAAGCA ACAAGCGACT TGGAAAGAAG TTGACGAAGC GGCAGAAAAC
GGCAAACGCG TTTCTATCGA TTTCGTAGGT TCTATCGATG GCGTAGAGTT TGAAGGCGGT
AAAGCAGAAA ACTTCCCTCT GGAAATGGGC GCAGGCCGCA TGATCCCAGG TTTTGAAGAC
GGTATCGTTG GCAAAACCAA GGGCATGGAA TTCGTTATCG ACGTGACTTT CCCAGAAGAT
TACCACGCTG AAAACCTGAA AGGTAAAGCG GCTAAGTTTG CTATCAAAGT GAACAAAGTA
GAAGCGCGTG AACTGCCAGA ATTGAACGAT GAGTTCGTTG CACGTTTTGG CGTAGCTGAA
GGCGGCGTTG ACGCTCTGAA AGCAGAAGTA CGTAAGAACA TGGAACGCGA ACTGAAGCAA
GCGATCAAAG CGCGCATCAA AGAGCAAGCG ATTGAAGGTC TGGTAAAAGA GAACGAAATC
CAAGTTCCTT CTGCACTGAT CGATCAAGAG ATCAACGTTC TGCGTCAGCA AGCTGCACAA
CGTTTCGGTG GCAATGTTGA AGCTGCGGCT CAACTGCCTC GTGAACTGTT CGAAGAGCAA
GCGAAACGTC GCGTAGTGGT AGGTCTGCTG CTGGGTGAAG TGATCCGTAC TCACGAGCTG
AAAGCGGACG AAGAAAAAGT GAAAGCACTG ATCACTGAAA TGGCGACTGC GTATGAAGAT
CCATCAGAAG TGGTTTCTTA CTACGAGCAA AACCAACAGC TGATGAACAA CATGCGTAAC
GTTGCTCTTG AAGAGCAAGC GGTAGACGCG ATCATTGCGA AAGCAAAAGT AACTGAAAAA
GCGATCAGCT TCAGCGAGCT GATGAACCCA GTTGCTGCTT AA
 
Protein sequence
MQVTVETLEG LQRRLNITVP AANIEDAVAA ELRNIAKNRR FDGFRKGKVP MKMVAKMYGK 
AVRQDVLGEV MQRHFIEAIV KEKINPAGAP TFAPVEIGEG KDLVFTATFE VYPEVELKGL
ENIAVEKPAA EVTDADVAEM LETLRKQQAT WKEVDEAAEN GKRVSIDFVG SIDGVEFEGG
KAENFPLEMG AGRMIPGFED GIVGKTKGME FVIDVTFPED YHAENLKGKA AKFAIKVNKV
EARELPELND EFVARFGVAE GGVDALKAEV RKNMERELKQ AIKARIKEQA IEGLVKENEI
QVPSALIDQE INVLRQQAAQ RFGGNVEAAA QLPRELFEEQ AKRRVVVGLL LGEVIRTHEL
KADEEKVKAL ITEMATAYED PSEVVSYYEQ NQQLMNNMRN VALEEQAVDA IIAKAKVTEK
AISFSELMNP VAA