Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1513 |
Symbol | tig |
ID | 5137233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1627044 |
End bp | 1628345 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640532971 |
Product | trigger factor |
Protein accession | YP_001217456 |
Protein GI | 147673079 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000677902 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTTA CTGTTGAAAC GCTAGAAGGC CTACAGCGCC GTCTGAATAT TACTGTTCCA GCTGCAAACA TCGAAGACGC TGTAGCAGCT GAATTACGCA ACATCGCGAA AAACCGTCGT TTCGATGGTT TCCGTAAAGG CAAAGTGCCA ATGAAGATGG TTGCGAAAAT GTACGGCAAA GCAGTACGTC AAGACGTGCT GGGTGAAGTG ATGCAACGCC ACTTCATCGA AGCGATCGTA AAAGAGAAAA TCAATCCAGC TGGCGCACCA ACGTTTGCTC CAGTTGAAAT TGGCGAAGGC AAAGATCTGG TTTTCACAGC AACATTTGAA GTTTACCCAG AAGTTGAACT GAAAGGCCTA GAAAACATCG CAGTAGAGAA GCCAGCAGCA GAAGTGACTG ACGCTGACGT AGCAGAAATG CTGGAAACTC TGCGCAAGCA ACAAGCGACT TGGAAAGAAG TTGACGAAGC GGCAGAAAAC GGCAAACGCG TTTCTATCGA TTTCGTAGGT TCTATCGATG GCGTAGAGTT TGAAGGCGGT AAAGCAGAAA ACTTCCCTCT GGAAATGGGC GCAGGCCGCA TGATCCCAGG TTTTGAAGAC GGTATCGTTG GCAAAACCAA GGGCATGGAA TTCGTTATCG ACGTGACTTT CCCAGAAGAT TACCACGCTG AAAACCTGAA AGGTAAAGCG GCTAAGTTTG CTATCAAAGT GAACAAAGTA GAAGCGCGTG AACTGCCAGA ATTGAACGAT GAGTTCGTTG CACGTTTTGG CGTAGCTGAA GGCGGCGTTG ACGCTCTGAA AGCAGAAGTA CGTAAGAACA TGGAACGCGA ACTGAAGCAA GCGATCAAAG CGCGCATCAA AGAGCAAGCG ATTGAAGGTC TGGTAAAAGA GAACGAAATC CAAGTTCCTT CTGCACTGAT CGATCAAGAG ATCAACGTTC TGCGTCAGCA AGCTGCACAA CGTTTCGGTG GCAATGTTGA AGCTGCGGCT CAACTGCCTC GTGAACTGTT CGAAGAGCAA GCGAAACGTC GCGTAGTGGT AGGTCTGCTG CTGGGTGAAG TGATCCGTAC TCACGAGCTG AAAGCGGACG AAGAAAAAGT GAAAGCACTG ATCACTGAAA TGGCGACTGC GTATGAAGAT CCATCAGAAG TGGTTTCTTA CTACGAGCAA AACCAACAGC TGATGAACAA CATGCGTAAC GTTGCTCTTG AAGAGCAAGC GGTAGACGCG ATCATTGCGA AAGCAAAAGT AACTGAAAAA GCGATCAGCT TCAGCGAGCT GATGAACCCA GTTGCTGCTT AA
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Protein sequence | MQVTVETLEG LQRRLNITVP AANIEDAVAA ELRNIAKNRR FDGFRKGKVP MKMVAKMYGK AVRQDVLGEV MQRHFIEAIV KEKINPAGAP TFAPVEIGEG KDLVFTATFE VYPEVELKGL ENIAVEKPAA EVTDADVAEM LETLRKQQAT WKEVDEAAEN GKRVSIDFVG SIDGVEFEGG KAENFPLEMG AGRMIPGFED GIVGKTKGME FVIDVTFPED YHAENLKGKA AKFAIKVNKV EARELPELND EFVARFGVAE GGVDALKAEV RKNMERELKQ AIKARIKEQA IEGLVKENEI QVPSALIDQE INVLRQQAAQ RFGGNVEAAA QLPRELFEEQ AKRRVVVGLL LGEVIRTHEL KADEEKVKAL ITEMATAYED PSEVVSYYEQ NQQLMNNMRN VALEEQAVDA IIAKAKVTEK AISFSELMNP VAA
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