| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1512 |
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| Symbol | clpP |
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| ID | 5135340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1626312 |
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| End bp | 1626914 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640532970 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001217455 |
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| Protein GI | 147674197 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000166308 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCCCA TTTTTGACGC ACTCGTACCT ATGGTGGTTG AACAAACCTC TCGTGGTGAG
CGTTCATACG ACATCTATTC TCGCTTACTA AAAGAACGAG TGATTTTCTT AACCGGGCAA
GTAGAAGATC ACATGGCAAA CCTTGTCGTG GCTCAACTGC TTTTCTTAGA ATCTGAAAAC
CCTGATAAAG ATATTTTCCT TTACATCAAC TCACCCGGTG GCAGTGTCAC TGCAGGGATG
TCGATTTACG ATACTATGCA GTTCATCAAG CCAAACGTGA GCACAGTGTG TATGGGACAA
GCCTGTTCAA TGGGCGCTTT CTTGCTTGCT GGTGGTGCAC CGGGCAAGCG TTATGTACTG
CCGAATTCTC GTGTCATGAT TCACCAACCA CTGGGTGGAT TCCAAGGCCA AGCCTCTGAT
ATTCAAATTC ATGCTCAAGA AATTCTGACC ATTAAAAACA AACTGAACCG TTTGTTGGCA
GAGCATACAG GCCAGCCAAT CGAAGTGATT GAACGCGATA CTGATCGTGA TAACTTCATG
TCGGCAGATC AAGCAGTGGA ATACGGTTTG GTGGATGCGG TGCTGAAACA CCGTGGCGAG
TAA
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| Protein sequence | MSPIFDALVP MVVEQTSRGE RSYDIYSRLL KERVIFLTGQ VEDHMANLVV AQLLFLESEN
PDKDIFLYIN SPGGSVTAGM SIYDTMQFIK PNVSTVCMGQ ACSMGAFLLA GGAPGKRYVL
PNSRVMIHQP LGGFQGQASD IQIHAQEILT IKNKLNRLLA EHTGQPIEVI ERDTDRDNFM
SADQAVEYGL VDAVLKHRGE
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