Gene VC0395_A1506 details

Gene Information

• Locus tag: VC0395_A1506
• Symbol: cmk
• ID: 5135673
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 1618695
• End bp: 1619384
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640532964
• Product: cytidylate kinase
• Protein accession: YP_001217449
• Protein GI: 147673554
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0283] Cytidylate kinase
• TIGRFAM ID: [TIGR00017] cytidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000000000236579
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAGAAAT ACATGTCTTC TCATACGCCA GTGGTTACCG TTGATGGACC TAGCGGTGCA 
GGTAAAGGCA CATTGTGCAT GTTGTTGGCT AAAAAACTCG GTTTTCAGCT ATTGGACTCT 
GGCGCGATTT ATCGCGTGTT GGCCTTGGCG GCTCTTCATC ATGGCGTTGA TCTTGAATCG 
GAAGACGCTT TGGTTCCTCT TGCTACGCAT CTTGATGTGC AGTTCATCGC GGAAGGCGAC 
TTAGTGAAAG TCATCCTCGA AGGTGAAGAT GTGTCCCGCG AGCTGCGTAA AGAAGAAACT 
GGGATGGCTG CGTCAAAAGT CGCGGCATTA CCTCGGGTAC GTGAAGCGCT GCTGCGCCGT 
CAACGCGCGT TTGCTAGTGG TATTGGATTA GTTGCAGATG GCCGTGATAT GGGCACAGTG 
GTTTTTCCAG CGGCGGAAGC AAAAATTTTC CTTGATGCGA GTGCGGAAGA AAGAGCCCGT 
AGACGCTTCA AGCAGTTGCA ACTGAAGGGG CTTGATGTTA AATTTGATGC CCTTTTAAGC 
GAAATTCAGG AAAGAGACGA CCGCGACAGA AATCGTGCTG TTGCTCCATT ACGTCCTGCT 
GAAGACGCAT TAGTGCTTGA TTCAACCACA TTGACTATCG ATGAAGTGGT GGAACAAGCG 
CTACAATATA TTGAATCTAA GCTAGTGTGA 

 

Protein sequence

MEKYMSSHTP VVTVDGPSGA GKGTLCMLLA KKLGFQLLDS GAIYRVLALA ALHHGVDLES 
EDALVPLATH LDVQFIAEGD LVKVILEGED VSRELRKEET GMAASKVAAL PRVREALLRR 
QRAFASGIGL VADGRDMGTV VFPAAEAKIF LDASAEERAR RRFKQLQLKG LDVKFDALLS 
EIQERDDRDR NRAVAPLRPA EDALVLDSTT LTIDEVVEQA LQYIESKLV