Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1501 |
Symbol | pyrF |
ID | 5135731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1613981 |
End bp | 1614676 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640532959 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_001217444 |
Protein GI | 147674982 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000199252 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGACC CAAAAGTGAT TGTTGCACTG GACTATGACA ATCTGGCGGA TGCGCTCGCG TTTGTGGACA AAATTGACCC AAGCACATGT CGACTCAAAG TGGGTAAAGA GATGTTTACT CTATTTGGTC CTGATTTTGT CCGTGAGCTG CATAAACGAG GTTTTTCTGT GTTTCTGGAT CTTAAATTTC ACGATATTCC GAATACCTGT TCAAAAGCGG TGAAAGCTGC CGCTGAGCTT GGGGTTTGGA TGGTGAATGT GCACGCGAGT GGTGGCGAGC GAATGATGGC AGCATCGCGT GAGATTCTGG AGCCGTATGG TAAAGAGCGC CCACTGCTGA TTGGTGTCAC TGTATTGACC AGTATGGAAT CTGCCGATTT ACAAGGTATT GGCATCTTGA GTGCGCCACA AGATCATGTG CTGCGATTAG CAACGCTCGC CAAAAATGCT GGTCTTGATG GTGTGGTATG CTCCGCACAA GAGGCATCAC TATTGAAGCA ACATTTGGGG CGTGAATTCA AATTGGTGAC GCCAGGAATT CGTCCAGCGG GTTCAGAGCA AGGCGATCAA CGCCGTATTA TGACTCCAGC CCAAGCCATT GCCTCTGGTT CAGATTATCT CGTGATCGGT CGCCCTATCA CTCAAGCCGC ACATCCTGAA GTGGTTCTGG AAGAGATAAA CAGCTCTTTA GTTTAG
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Protein sequence | MNDPKVIVAL DYDNLADALA FVDKIDPSTC RLKVGKEMFT LFGPDFVREL HKRGFSVFLD LKFHDIPNTC SKAVKAAAEL GVWMVNVHAS GGERMMAASR EILEPYGKER PLLIGVTVLT SMESADLQGI GILSAPQDHV LRLATLAKNA GLDGVVCSAQ EASLLKQHLG REFKLVTPGI RPAGSEQGDQ RRIMTPAQAI ASGSDYLVIG RPITQAAHPE VVLEEINSSL V
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