| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1486 |
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| Symbol | |
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| ID | 5136376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1595582 |
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| End bp | 1597000 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532944 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217429 |
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| Protein GI | 147674989 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3014] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00338852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATGG TGACGAATCA CGTGGTTCAA TACATTAAAC GACCTATACG TAGCCTCACT
CTTACTTCAC TACTGCTCGC GGGGTGTGCC AATCTCACTG CGGGCAATCT TTTTAGCCAT
TACAGTGCGC AAAACAGTGA TTTATATCAG TCTGTTGCGG CAGGGCAATA CCAACAAGCT
ACGCAGTTAT TGCCCGATTA TGTCGCCGGT GAAGTGTTAG ACAACCTTGA AAAAGGTCGG
GTTTATTTTC TTAGCCAGCA ATACGCAGAA AGCCAGCAAA GTTTGGCTGC TGCAGATTTG
GCGGTTAAAC AGCAGCAAGA CCGAGCGATC ATCTCTGTGA GTAGTACCGC GACCAGTGTG
GGTTCGCTGG CGGTCAACGA TAACTTGAAT GAGTACGAAC CTGCCGATTA TGAACTGGGC
TTTTTGCACC TGTACTTAGG GCTGAATTAT GTGCGCAATA ATGATCTGGA TGGTGCATTA
GTTGAAATGC GCCGCGCTAA CCAAGTTCAG GAAGCCGCTA AAAAACGCCG TGAACAAGCG
TTGTCCAGTG CGGAGCAAGA GATGCGCTCA CAAGGATTAT CCCCGAACTT AGGCAGTGTG
CTTGCACAAT ATCCAGATGC CGGAAAAACC TTACAAGCGG TGCAAAATGG TTATCTGTTG
TATCTTTCGG CGCTGCTTTA TGAAGCGGAT AATGATTTGA ACTCGGCTTA TGTTGACTAC
CGCAGAGCAC TGGCGGTTGC CCCCAATAAT CCATCGGTTA TTGATGGAAC ACTTCGAGTC
GCGTCTCGGC TTGGCATGCA ACAAGATCTC AAGCTTCTTA AACAGCAATA TGGTGAGCCT
AAACGCTTAA CCTCTGCGCA AGGCCGAGTC ATCGTCATAG AAGAGCAGGG TATAGTACAA
CCTAAGCAAG CGTGGCGACT CTCTTTACCT TTGTCTGACA GTCGTGGCAA TACGGCGCTG
TATTCTTTGG CTCTGCCTTA TTATTCATCT TCGGTGGCGC AGAGTCGTGT ACCGATCAGT
CTAAATGGCG CTAGTTTGGC CTCTATGCCA GTTACTGATG TGGATTTGAT GGCTAAGCAG
GCATTAACGG AGCAAATGCC TGCGCTGGTA CTGCGCCAAG CGCTGCGTGT GGTCGCCAAA
GACCAATTAC GCAAAGAGAC GACTCAGGAA GAGGATGTCG CCAATTTAGT GTTTAATATT
TGGAATACGT TAACGGAGCA GCCTGATACA CGCAGCTGGT TAACCTTGCC CGCCACAGTC
AATACGGCCA CCCAAGTGGT GAAAGCGGGT GATCAAGTGC TGGATATTGC AGGGACTCAC
TATACCTTTC ATGTTCCAGA AAATGGCACA GTGTTAGTTT GGCTATCTCA CCAAGGTAAC
AATGTGACAA TTTGGCATAA ACAACTAGGG ATACGGTAA
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| Protein sequence | MLMVTNHVVQ YIKRPIRSLT LTSLLLAGCA NLTAGNLFSH YSAQNSDLYQ SVAAGQYQQA
TQLLPDYVAG EVLDNLEKGR VYFLSQQYAE SQQSLAAADL AVKQQQDRAI ISVSSTATSV
GSLAVNDNLN EYEPADYELG FLHLYLGLNY VRNNDLDGAL VEMRRANQVQ EAAKKRREQA
LSSAEQEMRS QGLSPNLGSV LAQYPDAGKT LQAVQNGYLL YLSALLYEAD NDLNSAYVDY
RRALAVAPNN PSVIDGTLRV ASRLGMQQDL KLLKQQYGEP KRLTSAQGRV IVIEEQGIVQ
PKQAWRLSLP LSDSRGNTAL YSLALPYYSS SVAQSRVPIS LNGASLASMP VTDVDLMAKQ
ALTEQMPALV LRQALRVVAK DQLRKETTQE EDVANLVFNI WNTLTEQPDT RSWLTLPATV
NTATQVVKAG DQVLDIAGTH YTFHVPENGT VLVWLSHQGN NVTIWHKQLG IR
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