Gene VC0395_A1478 details

Gene Information

• Locus tag: VC0395_A1478
• ID: 5137281
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 1588287
• End bp: 1590362
• Gene Length: 2076 bp
• Protein Length: 691 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640532936
• Product: hypothetical protein
• Protein accession: YP_001217421
• Protein GI: 147675607

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAGA CAAAAACGTT GACCGCGATA AGCGTTCTCG CGTTGAGCCA TTTAATGACT 
CAAAGCACCG CATTCGCGTC AAGCAGCAGT GATATACAGA CCAAATTGAA ATGGTCTTGG 
TCTACCAGCG TTTTTCATCC TGAGTCCAAT CAGGTGATGG CCGCGCCAAT TGTCGTACAA 
CTCAACGACG ATAATGGCGA TGGCAAAATT GATGAGAAAG ATGTGGCTGA CATTATTGTG 
GTCACCTTTG AAGGTAATAA GTACGCGAAT GGTGGTTATA TCCGCGCCCT GAGCGGTGTG 
GATGGCTCTG AATTGTGGAG TTATAGCAAT GGAGGCGTGA TTGCCGATGC TCGCTATGCA 
CCAGCAGCCG CGGATCTCGA TGGTGACGGA CTGATTGAAA TCGTCTCCAC CAGCGCGTTG 
ACACCTTATA TCAATATTCT GGACCACCAA GGCAACATCA AAAAGCAACT GCTGAAATCT 
GCTTCAGGCT GGCGTTCTGT AGGTGATATT GCACTGGCAG ACATTAATGG CGATGGCAAC 
ATTGAAATTC TGGCTGCCGA TGGTGTTTAT AGTTACGAAT CAGGCTTGCT CTTTAGTCAT 
GATTGGGCAC CAAGTTCGAT TGCGTTTGAT AGCAATGGCG ATGGCCAACG TGAAGTCTTT 
GCCAACGGTA CACTCTATCA AAACAACGGC GCTTACCTAT GGCAATACCA AGCCAATGAC 
ACCGTTTGGT TCTCTTCCGT AGCAAACCTT GATGGCGATG ATAAGCCTGA ACTGGTCGTG 
TCGGTTCCAG CGTCTTTGAG CACACCCGAG AACAGTGAAA TCGCTGTGCT TGAGCATGAT 
GGCTCAGTGA AATGGCGAGT CAACAACCTA TCTAACCCAG GTGGTAGCGT ACAAGCCGTC 
TCCAGTTTTC TGGGTAAACC AAGCTCCAGT GCAACCACTG TTGATGCTCA GTCTGCCGTT 
TATGGCTACA CCGACTGGGC ACATCAACAA CGTGTTCTCG CAGAAAATCA TCAGTTAGCG 
ATTCGTTCTG GTGCTGTAGT CGATGCAATT GGTGCTAATA GCCAAAACAT GATCGGCGGC 
AGCGGTGGCT CACTGAGCAC AATTGATACC AGTAAAGTCC GTGCCATTGA TGTGACTTAC 
GGTAAAAACA AATACACCTG GAAGTATGGT GTCCTCGAGA TGAGTTTTAC TCTCGATAAC 
GGCGCAAAAG TCACTGTGGG GTCAAAAGAT TCTGCGTTTA CTTATCTAGG ATTAGAGTGG 
AAAACTAAAA CGGTTCCTTA TCTAGGTGTT GAGTGGCGTA CCAAAACCGT CTCTTACTGG 
TTCTTTGGCT GGCACACTAA ACAAGTGGCT TATTTAGCGC CAGTATGGAA AGAGAAAACC 
ATCCCTTATG CCGTTCCTGT GACACTGTCG AAATCGACCA CAGTACGCTA TGACATTCCA 
CAAGGCTCAC AGCTCTTGGG TATGAATGTA TGGAGTAAAG AGAAACACCT CTTTAAACAC 
AAACAGCAAG TCAATGCGGT GCAGTTCCTA GTTGGTAAAG TGACTGCTGA CCAATCACAC 
ATGGGCATTG TGTACGCGGG TTACTACGCG GTTGATATGT ACGATGCGCA AGGCAACAAA 
GTGTGGTCTG TGGCTAACGA TGACCTGAAC AGCGGCAAAA TTGGTGTCTC CGCTTACGAC 
TTTACCGGTG ATGGTATTGA TGAAGTGTTG GTTCAAGATC GTTTGAGAAT GCGTATTCTC 
GATGGCCAAA CGGGCCGTGT GATGGGCATT ATTGCGAACT CTTCTGGCAC CTTGTGGGAA 
TACCCAGTCG TGGCAGACTT AGAAGGCAAC AATAACGCTT CACTGATCAT GGTTGCCAAT 
GACTACGATC GCGAAAGCCA AGTCAACCAC GGTGTGTTTG TGTATGAGTC CGCCAATCCA 
AGCAAGCCTT GGCGAAATGC GACTCGTATC TGGAACCAGT ACGCGTTTAA TTTCTCAGAT 
ATTAACGCCA ACGGTACTAT CCCAACGAAT GCACAACCAA GCTGGTTAAC CCACAACAGC 
TTCCGTTCAG CGACCATTCG CGTTCCGCTG AAGTAA 

 

Protein sequence

MKQTKTLTAI SVLALSHLMT QSTAFASSSS DIQTKLKWSW STSVFHPESN QVMAAPIVVQ 
LNDDNGDGKI DEKDVADIIV VTFEGNKYAN GGYIRALSGV DGSELWSYSN GGVIADARYA 
PAAADLDGDG LIEIVSTSAL TPYINILDHQ GNIKKQLLKS ASGWRSVGDI ALADINGDGN 
IEILAADGVY SYESGLLFSH DWAPSSIAFD SNGDGQREVF ANGTLYQNNG AYLWQYQAND 
TVWFSSVANL DGDDKPELVV SVPASLSTPE NSEIAVLEHD GSVKWRVNNL SNPGGSVQAV 
SSFLGKPSSS ATTVDAQSAV YGYTDWAHQQ RVLAENHQLA IRSGAVVDAI GANSQNMIGG 
SGGSLSTIDT SKVRAIDVTY GKNKYTWKYG VLEMSFTLDN GAKVTVGSKD SAFTYLGLEW 
KTKTVPYLGV EWRTKTVSYW FFGWHTKQVA YLAPVWKEKT IPYAVPVTLS KSTTVRYDIP 
QGSQLLGMNV WSKEKHLFKH KQQVNAVQFL VGKVTADQSH MGIVYAGYYA VDMYDAQGNK 
VWSVANDDLN SGKIGVSAYD FTGDGIDEVL VQDRLRMRIL DGQTGRVMGI IANSSGTLWE 
YPVVADLEGN NNASLIMVAN DYDRESQVNH GVFVYESANP SKPWRNATRI WNQYAFNFSD 
INANGTIPTN AQPSWLTHNS FRSATIRVPL K