| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1474 |
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| Symbol | |
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| ID | 5137442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1581583 |
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| End bp | 1582803 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640532932 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217417 |
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| Protein GI | 147675143 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGGAT TTATGTTTCA TCCGATTTCG GCTTTTATTG GTTTGCGCTA TTTGCGCGGC
CGCTCAGGGG ATCGTTTTAG CCGCTTTGTC TCTTATATGT CGACGGCGGG GATCACGATC
GGTGTGATGT CGCTAGTTAC TGTTTTATCG GTGATGAACG GTTTTGAGGC GCAGCTTAAG
TCACGCATTC TTGGGGTGTT ACCTCAAGCG GTTGTCACCG AAGCCGCAGG CAAAACCACC
CTCAGCGCAA CGCCCCCAGA TTTTGTCACG GCATTATCGA CTCAGCGCCC ACCAGAGCCG
TTAGTGCGCA GTGACGCGGT GGTGCAAAGT GCCTCGCAAC TGGCTGCGGG TTTGTTGATT
GGTATCGAGC CACAACAAAA TGATCCGATT GAGCAACACC TGATTGCAGG TCGGGTAACG
GCTTTGCAAG CGGGCGAGTA TCAACTCTTT CTTGGGCATC TTCTTGCGCG CAGTTTGAAT
GTCACCGTGG GTGATAAAGT GCGTTTGATG GTGACAGAAG CGAGCCAATT TACCCCGTTG
GGCCGTTTGC CCAGTCAGCG AAACTTTACG GTAGCGGGAA TTTTTAATAC CGGTTCGGAT
GTGGATGGGC AACTCATGGT GACTCATCTG CGCGATGCGG CCAAGCTATT GCGCTATGAT
GCACAGACCA TTTCAGGTTG GCGGCTATTT TTTGATGACC CGTTTGTGGT CAGTCAGCTT
GCCGAACAGC CATTGCCGCA AGATTGGCAA TGGAGCGACT GGCGTGAGCA GCGCGGTGAA
CTGTTTCAAG CGGTACGTAT GGAAAAGAAC ATGATGGGGC TGATGCTCGG ACTTATCGTT
GGGGTGGCTG CGTTTAATAT TATTTCTGCG CTGATCATGG TAGTGATGGA GAAGCAGGCT
GAGGTGGCGA TTTTAAAAAC CCAAGGCATG CAGTCACAAC ATGTGCTGGC GATTTTCATG
GTACAAGGCG CCAGCAGCGG TGTGATTGGT GCGCTGGTTG GTGGTTTACT TGGCGTGCTG
TTGGCGGCCA ATTTAAATAG CCTGATGGAA GCCTTAGGTG TTGCCCTTTT TTCGGTGGGT
GGCAGTTTGC CAGTGGCGAT TGATCCGCTG CAGATTGTCC TCGTTATTGT TCTTGCGATT
GTATTAAGTC TGTTGGCAAC GCTGTTTCCA GCCTATCGCG CATCTTCTGT TCAACCCGCT
GAGGCGTTAC GTTATGAATA A
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| Protein sequence | MVGFMFHPIS AFIGLRYLRG RSGDRFSRFV SYMSTAGITI GVMSLVTVLS VMNGFEAQLK
SRILGVLPQA VVTEAAGKTT LSATPPDFVT ALSTQRPPEP LVRSDAVVQS ASQLAAGLLI
GIEPQQNDPI EQHLIAGRVT ALQAGEYQLF LGHLLARSLN VTVGDKVRLM VTEASQFTPL
GRLPSQRNFT VAGIFNTGSD VDGQLMVTHL RDAAKLLRYD AQTISGWRLF FDDPFVVSQL
AEQPLPQDWQ WSDWREQRGE LFQAVRMEKN MMGLMLGLIV GVAAFNIISA LIMVVMEKQA
EVAILKTQGM QSQHVLAIFM VQGASSGVIG ALVGGLLGVL LAANLNSLME ALGVALFSVG
GSLPVAIDPL QIVLVIVLAI VLSLLATLFP AYRASSVQPA EALRYE
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