| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1464 |
|---|
| Symbol | |
|---|
| ID | 5137542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 1570136 |
|---|
| End bp | 1571407 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640532922 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001217407 |
|---|
| Protein GI | 147673749 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2718] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAAT TTATCGACAG AAGGCTAAAC GGCAAAAATA AAAGTACCGT CAACCGACAA
CGCTTTTTAC GCCGTTACAA AGAGCAGATT AAAGAGTCGG TTGCGGATGC CGTTAACCGC
CGCTCAATCA CTAATACCGA GTCTGGAGAA GATGTTTCTA TTCCAACTCG TGACATTAAA
GAGCCGATGT TTCATCAAGG CAAAGGCGGC GTGCGTGAAC GTGTGCATCC GGGCAATGAC
CAATTTATTC GTGGCGATAA AATCGATCGC CCTAAAGGTG GCCAAGGCAG CGGCGGCTCA
GGTGAAGGTG AGGCCAGTGC CGATGGTGAA GGCAGCGATG ATTTCGTATT CCAAATTTCC
AAAGATGAAT ACCTCGATAT TCTGTTTGAA GATTTGGCGC TGCCGAATCT CAAGAAAAAC
CAAGTTAACA AAATCACCGA ATGGAAAACC CATCGCGCAG GTTTTCAAAC CTCGGGGGTT
CCCTCCAATA TTTCAGTGGT GCGTTCACTG CAACAATCTT TAGCGCGCCG TACGGCGATG
ACCGCTGGTA AACGCCGTTT GATGAGTGAG TTGGAAGAGG AACTCGAACG TATTCAGCGC
AGCGAACCAC CACAAATCAT GGAAGAGATG CGCATCAAGC AAGAGATTGA GGAGCTACGC
AATAAAATCG ATAGCGTGCC CTTTATCGAC ACCTTTGATT TGCGCTTCAA AAACTACGAA
AAGCGCCCGA TTCCCTCCAG TCAGGCGGTA ATGTTCTGTC TGATGGACGT GTCAGGCTCG
ATGGATCAAG CGACCAAGGA TATTGCAAAA CGCTTTTATG TACTGCTGTA CCTGTTCTTA
ACTCGCACTT ATGAAAACGT GGAAGTGGTA TTTATTCGCC ACCATACCCA AGCTAAAGAA
GTGAATGAGC ACGACTTCTT CTACTCGCAA GAAACCGGCG GCACCATAGT GTCCAGTGCA
CTCAAGCTGA TGCATGAAAT CATTGAAGCT CGCTACCCAC TGGGTGAGTG GAACATCTAT
GGTGCACAAG CCTCTGATGG GGATAACTGG GCAGACGATT CACCACGCTG CAAAGAGTTA
CTCTCTAACA AGCTGCTGCC CTATTGCCAA TACTATGCCT ATATCGAAAT CACGCGTCGC
TCACACCAAA CGTTGTGGCA CGAATATGAA AAATTACAGG CCTCCTTCGA TAACTTCGCG
ATGAAGAACA TCCGCAGTGT TGAAGATATT TTCCCTGTGT TTAGGGAGCT GTTCCAAAAG
GAAAATGCGT AG
|
|---|
| Protein sequence | MAQFIDRRLN GKNKSTVNRQ RFLRRYKEQI KESVADAVNR RSITNTESGE DVSIPTRDIK
EPMFHQGKGG VRERVHPGND QFIRGDKIDR PKGGQGSGGS GEGEASADGE GSDDFVFQIS
KDEYLDILFE DLALPNLKKN QVNKITEWKT HRAGFQTSGV PSNISVVRSL QQSLARRTAM
TAGKRRLMSE LEEELERIQR SEPPQIMEEM RIKQEIEELR NKIDSVPFID TFDLRFKNYE
KRPIPSSQAV MFCLMDVSGS MDQATKDIAK RFYVLLYLFL TRTYENVEVV FIRHHTQAKE
VNEHDFFYSQ ETGGTIVSSA LKLMHEIIEA RYPLGEWNIY GAQASDGDNW ADDSPRCKEL
LSNKLLPYCQ YYAYIEITRR SHQTLWHEYE KLQASFDNFA MKNIRSVEDI FPVFRELFQK
ENA
|
|---|
| |